Asparagus officinalis (garden asparagus): 109823212
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Entry
109823212 CDS
T05243
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109823212
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109823212
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109823212
NCBI-ProteinID:
XP_020245087
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Position
9:12661479..12664195
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AA seq
381 aa
AA seq
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MSSLRILLLISSLSLSMASYNVMDFGARPDGRSDSARAFLAAWDKACRAHKPASIVVPAG
RFYISQALFQGPCNNGALRIFIQGTLVAPSGYSHSSTWITFKYVEGVSIHGGTLDGQGQP
LWKCKMRGGDCPGGATSLTIGESNNIVIDSLSSLNSEMFHISVFASSYVTIRGAKITAPG
DSPNTDGIHIQKSTYVNVTGSTIETGDDCISMGEGTSNVWIEKVNCGPGHGISIGSLGDQ
PQQEGVQNITVKSVVFTGTQNGLRIKTWGKPSSGFVRGVTFRHAVMNYVQNPIVVDQNYC
PGNVNCPNQSSGIKISKVSYNDIQGSSATPIAVKFDCSPTNPCRKIGLQNIKLTYGKKPA
QSYCSHVHGKTSGFVIPPSCL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccttcgcattctcctcctaatctcttccctctcattatcaatggcatcctac
aatgtcatggactttggggcccggcccgatggtcggagcgactcggcacgggcctttctt
gctgcatgggacaaggcctgccgggcccataagcccgcatcaatcgtcgtgccggcaggc
cggttttacattagccaggccttatttcaaggcccatgtaacaatggtgcacttaggatt
tttatccaagggactttggttgctccctctggttatagccattcaagtacttggatcaca
ttcaagtatgttgagggtgtttctattcatggaggcactcttgatggtcaaggacagcct
ctgtggaagtgcaagatgagaggaggcgattgtccaggtggtgcaacgtctctgacaatt
ggagaatcaaacaatatcgtcatcgacagtctctcgtcgctaaacagcgaaatgttccac
atttcagtatttgctagcagctatgtaactattcggggagccaaaatcacggcgcccggc
gacagccccaacaccgacggaatccacatccagaaatcaacttatgtaaacgtcacagga
tccacgatagagaccggcgatgactgcatatcgatgggcgagggtacgtccaacgtctgg
atcgagaaggttaactgtggtcctggacatggcattagcatcggaagcttgggcgaccaa
ccacaacaagaaggagtgcagaacattacggtgaagtccgtggtgttcaccgggacacag
aacggactcaggattaagacgtggggaaaacccagcagtgggtttgtacgtggagttaca
tttcgacacgcagtcatgaattatgtccagaatcccattgtagttgaccaaaactactgc
cctgggaatgtaaattgcccgaatcagagttcaggcattaagatcagcaaggtctcctac
aacgacatacaaggatcgtcggcaacaccaatcgccgtcaaatttgactgtagtccgaca
aacccttgccggaaaataggattgcagaacataaagctcacatacggtaagaaaccggcg
caatcttattgcagtcatgtgcacggcaaaacttcaggctttgttattcctccaagttgt
ttatga
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