Asparagus officinalis (garden asparagus): 109823247
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Entry
109823247 CDS
T05243
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109823247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aof03400
]
109823247
Enzymes [BR:
aof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
109823247
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109823247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecR_HhH
HHH
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
109823247
NCBI-ProteinID:
XP_020245120
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Position
9:complement(17368338..17370295)
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AA seq
181 aa
AA seq
DB search
KKLFYCSTSINLLLLNCLILVQTIRAKYIVGTVKALQAKPGGGAEWLTSLRGRELNEVID
ALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLLPELAGKSLTPKLCGQVAE
AFVSKFGNYAGWAQNVLFIGELPSQKALVATVEETKSSKSKSSKRRRVTSKAAVQVLVES
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
aaaaaattgttttattgtagcacttcaattaacttgctacttttgaattgtctaattctt
gtacaaacaatcagggcaaagtatatagttggaacagttaaagccctgcaggcaaagcct
ggtggaggtgcagagtggcttacgtctcttcgtggtcgggagctcaatgaggtgattgat
gccctctgtactttgcctggagtaggaccaaaagttgctgcctgcattgctctgttctcc
ctcgatcagcatcatgcaattcctgttgatactcatgtgtggcagattgcgaccaggtat
ctactgccagagcttgcaggcaagagtctaacaccaaagctatgcggtcaagtcgctgaa
gcgttcgtgtcgaaattcgggaactatgctggttgggcacaaaatgtgcttttcattggc
gagttaccttctcaaaaggctcttgttgctactgtggaagagaccaaatcttcgaagagc
aaatcttcgaagaggagaagagtgacaagcaaagcggccgtccaggttttggtggagagc
gggtaa
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