Asparagus officinalis (garden asparagus): 109823369
Help
Entry
109823369 CDS
T05243
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109823369
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109823369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
109823369
NCBI-ProteinID:
XP_020245232
LinkDB
All DBs
Position
9:36680441..36735380
Genome browser
AA seq
517 aa
AA seq
DB search
MRMREEHDQQIRVLSNQFSESSRRNLTNQAGNNSEVDERLNAENPPFDQNIGGGPIEDNN
TGGGPTEDNNTGSGPVIPLRNRPRSDTDEDEKIMDLGSKINTLMSAQGIKRTSILSPYPR
KWDSIPYPEAYFLVLCCLAYYFGGGLSQIANVIDYGAVGDGKRDDTQAFSTAWDVACNAS
DSTTMLIPSGKTFMIYPVVFKGPCKSPVHVQVDGNIVAPSQIWKRPDSDHWITFLGVKEG
IRINGSGQFDGNGNIWWTCREKNICSDAPDTLAFGNCSNITLEGLRFVNSPMKHISIFKS
SGVQLRNLTILAPGESPNTDGIHIEESQQAEISNSIIGTGDDCISIGSGTSNLNITQINC
GPGHGISIGSLGRGGTKATVNQVLISNCKFNKTTNGLRIKTWPGGSGLVNDIKFVGNNFT
EVYNPIIINQFYCDHSKNCGTGGSAVKIQDVHYIGASGTSASTNAITLNCSASAPCTGLI
MDDVSLQYVADPPATAFCINAQGTEKSPVKPKVPCLN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgagggaagagcatgatcaacaaattcgggtcttatccaatcaattcagtgaa
tccagccgtcgcaaccttactaaccaagcaggtaacaattcagaggtggatgaacgtctc
aatgctgagaaccctccctttgaccagaacattgggggtggtcccatcgaagacaacaat
actgggggtggtcccaccgaagataacaatactgggagtggtcctgttattcctctcagg
aatcgtccaagatctgatacagacgaggacgagaaaataatggaccttgggagcaaaatc
aacacgctgatgtctgctcaggggataaaaaggaccagtattctgtctccctatccaaga
aagtgggattcaattccgtatccggaagcatattttcttgtgttgtgttgccttgcttac
tacttcggtggaggactatctcaaatagcaaatgttattgactatggagctgttggagat
gggaaaagagatgatactcaagcattttcaacagcttgggatgtagcttgtaatgcttca
gattctacaacaatgttaatcccctcagggaaaacatttatgatttatccggtggtcttc
aaaggcccttgcaaatccccagttcatgttcaggttgatggcaatattgtagctcctagc
caaatatggaagcgaccagacagtgatcattggattacatttctaggagtcaaagaagga
ataagaatcaatgggagtggtcaattcgatggaaacggaaatatttggtggacttgccgt
gaaaaaaatatatgttcagatgctcctgatacattggcattcggcaattgcagtaatatc
acattggaaggcttgagatttgtaaacagcccaatgaaacatatttctatttttaagtct
agcggagttcaattaaggaacctcacaattctagctcctggtgaaagtcccaatactgat
ggcatccacattgaagaatctcagcaagctgaaatttcaaattctataattggaacaggt
gatgattgtatatcaattggatctggtacatcaaatcttaatatcacccaaataaattgc
ggaccaggacatggcataagtattggcagcttgggcagaggtggcactaaggcaactgtg
aatcaagttcttatctccaattgcaaatttaataaaacaacaaatggtttacgaattaaa
acttggccgggtggctctggtttggttaatgacatcaaatttgtgggaaataatttcact
gaggtttataatccaataattataaaccaattctactgtgaccatagcaaaaattgtggc
accgggggatcggctgtcaaaattcaagacgtgcactacataggagcatcagggacatct
gcaagcacaaatgcaatcaccctcaactgcagcgcctccgcgccatgcacgggtctcatt
atggacgacgttagcctacagtacgtcgcagacccacctgccacggccttttgcattaat
gcccaagggaccgagaaatctccggtcaagccaaaagttccttgcttgaattag
DBGET
integrated database retrieval system
