Asparagus officinalis (garden asparagus): 109823441
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Entry
109823441 CDS
T05243
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109823441
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109823441
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109823441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-rbx1
LCE6A
zf-RING_4
TRAF3_RING
zf-Nse
Zn_ribbon_6
RING_XB3-XBAT31
Prok-RING_4
Humanin
zf-RING_6
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
109823441
NCBI-ProteinID:
XP_020245308
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All DBs
Position
9:39376592..39388375
Genome browser
AA seq
201 aa
AA seq
DB search
MSSNSSSRRCARRSVRDSNRSKTNLDIDLNSASVIDLEASDDDDVQMLSSPRGFPRARTL
LRKRKRPDVVVLDEEPGTHSAPINDPIILRSINWRNRRRRIPPNRSIINCETYLISEDDL
SAKRKKVSEPVQEKAVPKEPSYICPICMGELVSPCSTNCGHIFCEGCIKSAIQVKKQCPT
CRTKLTMKKSFHKVFLPTSTN
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgagttctaattcgtcttcgaggcgatgcgcgaggaggagcgttagggattcgaatcga
tcgaagacgaatctcgacatcgacctcaactctgcatcggtgatagatcttgaggctagt
gacgacgacgatgttcagatgctgtcgtctccgagagggtttcctcgggcgaggactctg
ttaaggaagaggaagcgtccagatgtagttgttctggatgaagagcctggaactcattca
gctcctataaatgatcctataatcttacggagcatcaattggcgcaacaggaggcgaaga
attccgccaaacagatctattattaattgcgaaacttatttgatttcagaagatgatctt
agtgccaagagaaagaaagtgagcgagcctgtgcaggaaaaggcagtacctaaagagccg
tcttatatttgccctatttgcatgggcgaattagtttcaccgtgctcaacaaactgtggt
catatattttgtgaagggtgcatcaaatctgccatccaagtgaagaagcaatgtcctact
tgcaggactaaattgaccatgaaaaagagctttcataaagtgtttcttcctacttccacc
aactag
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