Asparagus officinalis (garden asparagus): 109823549
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Entry
109823549 CDS
T05243
Name
(RefSeq) protein LHY-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109823549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aof03000
]
109823549
Transcription factors [BR:
aof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
109823549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
109823549
NCBI-ProteinID:
XP_020245416
LinkDB
All DBs
Position
1:complement(46826349..46859191)
Genome browser
AA seq
714 aa
AA seq
DB search
METNSSGEELVVKTRKPYTITKQREKWTEEEHNKFIEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEAITKGVPLGQAHDIEIPPPRPKRKPSSPYPRKTGGGSLSSSGEAT
EEKSLKSLPPLITCKQAGDVANNAGWKIQGEKDNSEEGSCSEVLNLFQDTPAASISSLSN
GSSNLCAYNRLMPLEKGMKDKTMLKGSSMSIEVNENRKENSSVSANRSSAELKGTYVSLE
MKSAQEEGVDVSKQPDNMDLATDNLQGNKDIDFMKRSGSGNLPTAITGQGSTNVNAETSL
NPTIPSTPEINTNSGTSSVSHPFPSFPPFTQFPSNPDAYRPVHNISTAFSSLILSTLLQH
PAVHAAACVAASFWPIAGLNASMDSSSETGHGGLPARHINHTPSMAAIAAATVAAASAWW
ATQGLLPMYPHIHPGFTSPPPATSTVPIVDPSRTPDGRKDEKFGTFENSVNMDPEQSEAN
KAQHPSPKSLSSSSSDSDESRRSELDGAQANKFKSLSSNGVHDSDKARNKKADRSSCGSN
TPSSSELEGDMVLKKHDGDKDEPKQTFNPPSGDANNRRIRSGGNMNESWKEVSEEGRLAF
QALFNREVLPQSFSQPYGDSMIMTANSKEAIDELPVDLNVKASSEPTYIYYFQGSGNTFG
EAPLTNEIIHGKLKARRTGFKPYKRCSMEAKESRATAGDETGNKRIRLEGEASI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaattcttcgggtgaagagcttgtcgtaaagacaagaaaaccatatacaatc
acgaagcagcgagagaagtggaccgaggaagaacataacaagtttattgaagctctgaaa
ctgtatggaagagcttggcagcggattgaagagcatattggtacaaaaacagcagtgcag
attcggagtcatgcacaaaagttcttcacaaagttggagaaagaagccattacaaaaggt
gtccctcttggacaggctcatgacatagaaatccctcctccaagacctaaaaggaagcca
agtagtccatatcctcgaaaaaccggtggaggttctctctcttcatccggggaagcaaca
gaggagaaatcattgaaatctcttcctcctttgataacctgtaaacaagctggagatgtt
gcaaacaatgcaggttggaagatacaaggagagaaagacaattctgaagaaggcagctgc
tcagaagttctcaaccttttccaagatactcctgctgcttccatctcttcactgagcaac
gggtcttcgaacctctgtgcctacaacagactcatgcccctcgagaaaggaatgaaagac
aagaccatgttaaaagggtcttcgatgtccattgaggtgaatgaaaataggaaagaaaat
agctcagtcagtgcaaatcgcagcagtgcagaacttaaaggaacttacgtaagcttagag
atgaaatctgcacaggaagagggagtagacgtatctaagcagccagacaacatggattta
gcgactgacaatctgcaaggtaataaagatattgatttcatgaagagaagtggaagtgga
aatctgcctacagctattactgggcaaggtagcactaatgtaaatgcagaaacatccctg
aatcctacaattccttcaacacctgagatcaataccaactctggaacatcttctgttagt
catcccttcccttctttcccaccattcacccaatttcctagcaatccagatgcttatcgt
ccagtccacaacatttcaactgctttctcaagcctcatattgtctactctgttacagcat
ccagcagttcatgcagcagcttgtgtggcagcatcattctggccaattgcaggtctaaat
gcttcaatggactcatcatcagaaactggccatggtggacttcctgcaagacatataaac
cacactcctagcatggctgccattgccgctgcaactgttgcagctgcatctgcttggtgg
gctactcagggattactgccaatgtatccccatattcaccctggattcacttcccccccc
ccagccacaagcaccgttccaatagtggatccatctcgaacaccagatggtaggaaagat
gagaaatttggcacattcgaaaattctgtaaatatggatccagaacaatctgaggccaat
aaagctcaacatccatctccgaaatcattgtcttcttcatcttcagactcggatgagagc
agaagaagtgaacttgatggtgctcaagccaacaagttcaaatccctatctagtaatggc
gttcatgatagtgacaaggcgaggaataagaaggctgatcgttcttcctgtggctcaaat
acaccttccagcagcgaactagaaggagatatggtattgaaaaaacatgatggagataaa
gatgaacctaaacaaactttcaatcctccttcaggagatgctaacaatcgccgaattaga
agtggagggaacatgaatgaatcatggaaggaagtctctgaagagggacgtctcgctttc
caagctttgtttaatagagaggtgctgcctcagagcttttcgcagccatatggtgattcg
atgataatgacagctaacagcaaagaagccatcgatgaattaccagttgatcttaatgtg
aaggcatccagtgaaccaacatatatttattatttccagggatctgggaatacctttgga
gaagctcccttaaccaatgaaatcattcatgggaagctgaaagctcgtaggacagggttt
aagccttataagagatgttcaatggaagccaaggagagcagggcaacagcgggtgatgaa
actggtaacaaaagaattcggctggaaggagaagcttcaatttga
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