KEGG   Asparagus officinalis (garden asparagus): 109823616
Entry
109823616         CDS       T05243                                 
Name
(RefSeq) LOW QUALITY PROTEIN: serine hydroxymethyltransferase 7-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof00260  Glycine, serine and threonine metabolism
aof00460  Cyanoamino acid metabolism
aof00630  Glyoxylate and dicarboxylate metabolism
aof00670  One carbon pool by folate
aof01100  Metabolic pathways
aof01110  Biosynthesis of secondary metabolites
aof01200  Carbon metabolism
aof01230  Biosynthesis of amino acids
aof01240  Biosynthesis of cofactors
aof04981  Folate transport and metabolism
Module
aof_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:aof00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    109823616
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    109823616
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    109823616
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    109823616
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    109823616
Enzymes [BR:aof01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     109823616
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_5 WDR55
Other DBs
NCBI-GeneID: 109823616
NCBI-ProteinID: XP_020245482
LinkDB
Position
9:complement(17300097..17315986)
AA seq 568 aa
MDLTRNRSSLSLGFHSHADDTVSESRSIPLQLLDQQSESHREESVNDEGSEEGQKEEEFS
ILGYTMCIKRQKRESSTSCLSSSLHPLNKQAADPDHETRRSNVRSWGNQPXIGEIMEKEK
CRQVKGIELVASENYVCRAVLDALGSHLTNKYSEGMPGARYYGGNQYIDQIERLCWERAL
AAFNLDPESWGVNVQPYSCTSANFAVYTGLLLPSDRIMGLDSPSGGHVSHGFYTPSGKKI
SGASIFFESLSYKVNPHTGYIDYEKLEERAMDFHPKILICGGSSYPREWDYARFRQIADK
CGAVLMCDMAHISGLVAAKECSSPFEYCDIVTSTTHKSLRGPRGGIIFFRKGKKMRKHGF
SVCQTDESEQYDFEDRINFAVFPSLQGGPHNNHIAALAIALKQVATSEYKAYIQQVKKNA
QALASALMRRKCRLVTGGTDNHLILWDLRTFGLTGKSFEKVCEACHISLNKTPIFGENGA
ICPGGVRIGTPAMTTRGCLEGDFETIAEFLLRAAHIASTLQKEHGKYQKEFLKGLQHSRD
IAELRNHVETFSSQFAMPGSDLGLFNEL
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggatctcactcgtaatcgatcgagcctttctctaggtttccactcgcacgctgatgat
accgtctccgaatctcgatcgatccctctccagttgctcgaccagcagtcggagagtcac
agagaagaatcggtcaacgatgaaggatccgaagaaggtcaaaaggaggaggaattcagt
attttaggctacacgatgtgcatcaagaggcaaaagagggaatcttcgacttcttgcttg
tcgtcctctcttcatcctttgaataaacaagcggccgatcctgatcacgagacgagaaga
tcaaatgtcagatcttgggggaatcagccgnctatcggcgagatcatggagaaagagaag
tgtcggcaggtgaaagggattgagctggtcgcgtctgagaactatgtgtgccgagctgtg
ctagatgctttaggaagtcatttgaccaacaagtactctgaggggatgccgggtgctcgg
tattatggtgggaatcaatacattgatcagattgaaagattgtgttgggaacgagctctt
gctgcctttaaccttgatcctgagtcatggggtgtgaatgttcagccttattcgtgtact
tctgctaattttgcagtgtatacagggctattgttgccaagcgatcggattatgggattg
gattcaccctcgggtggccatgtaagtcatgggttttatacaccaagtgggaagaagata
tcgggggcttccatattttttgagagcttgtcatataaggtgaatcctcatactgggtat
attgattatgagaagttggaggagagagcaatggattttcacccaaagattttgatttgt
ggggggagttcatatcccagggagtgggattatgcgaggtttcggcagattgcagataag
tgtggagctgtattgatgtgtgatatggcgcacattagtgggctagtggcggctaaggag
tgttcgagcccgtttgaatattgtgatattgtcacttcaacaacacacaaaagccttcgg
ggtccaaggggtggtataattttttttaggaaaggtaaaaaaatgaggaagcatggattt
tctgtgtgtcaaacagatgagagtgagcaatatgattttgaagataggataaatttcgct
gttttcccatcattacaagggggtcctcacaataaccatattgcggctttggctatagcc
ttgaaacaagttgctacttctgaatacaaagcttatatccaacaggttaagaaaaatgca
caagcactagcatcagccttaatgagaagaaaatgcagactagtaactgggggtacagac
aaccatttgatattatgggatttgagaacattcggtttaacaggtaaaagctttgagaaa
gtttgtgaggcttgccacattagcttgaataaaacccctatatttggtgaaaatggtgct
atttgtcccggaggtgtgagaataggcacccctgccatgacgacgagaggttgtctagag
ggagattttgagacgatagctgaattcctcctcagagctgcacatattgcaagtaccctt
caaaaggagcatgggaagtatcaaaaggaatttctcaagggactgcaacatagcagagat
attgctgagctaagaaaccacgttgagacgttttcttcacaatttgccatgcctgggtca
gacctaggattattcaatgagttatag

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