Asparagus officinalis (garden asparagus): 109823893
Help
Entry
109823893 CDS
T05243
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aof03400
]
109823893
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109823893
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
109823893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_30
DEXQc_Suv3
T2SSE
AAA_19
Sin3a_C
Motif
Other DBs
NCBI-GeneID:
109823893
NCBI-ProteinID:
XP_020245913
LinkDB
All DBs
Position
9
Genome browser
AA seq
2081 aa
AA seq
DB search
MLVPLPRLTSSLRPHYDVDQAYLHRKSILQSLKPKRLNNESELARKLVDRWDEASKEVRQ
AYKQFLGAVVELIDGEVYSEEFHEVVQTIYHLYSNPDTDSDTSKMHTEKKEELQRLVGCP
IPDSILQRVSSLAQKLFSLQHNGPEAANGQAMMTDGLCESNPEFGFKITFQAPARFLLDV
PLENGVSTTGDSYTGSSIFREKHDYYVEATHHLNAAREVVNLRWLKDACDLIVEGGGSLL
TGDELAMALCRVLMSNKAGDEIAGDLLALVGDGAVETVHNLLSHRKELVDAISHGLHMLK
SEKSSSSSQSRMPSYGTQVTIQTESERQLDKLRRKEEKRNKRGADYGSAYDMATDSFSSL
LLASEKRQPFDDLIGTGEGLRSCALPQGSTRLCEKGYEEVSIPPTPTAPMTPDEKLIEIK
DLDDFAQTAFHGYKSLNRIQSRIFQTTYHSNENILVCAPTGAGKTNIAMISVLHEIKQHF
RDGILHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNLAVKELTGDMQLSRNELEETQMI
VTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGAVIEALVARTLRQVESTQSMI
RIVGLSATLPNYKEVAQFLRVNLATGLFFFDSSYRPVPLAQQYIGITEKDFSRKMTLFND
ICYKKVVNSLKQGHQAMVFVHSRKDTGKTARMLHELATKYEELEFFINDKDPQFSLVKME
VSKSRNKELVELFDYGIGIHHAGMLRADRGLTERLFSRGLLKVLVCTATLAWGVNLPAHT
VIIKGTQLYDPKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAFYLRLLTS
QLPIESQFVTSMKDNLNAEVALGTVTNVKEACAWIGYTYLFIRMKTNPLVYGISWDEVIA
DPSLLSKQRSFIVDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYLQYSSVETYNEML
RRHMNDSEVINMVAHSSEFENIIVRDEEVDELEALIKKFCPLEVKGGPTDKYWKISILIQ
VYISRGSIDSFSLISDAAYISASLARIVRALFEICLRRGWCEMSAFMLEYCKAVDKQIWP
HQHPLRQFDRDISAEILRKLEEREADLDHLFEMEEKEIGALIRFAPGGKLVKQYLECFPS
INLSATVSPITRTVLKVDLLITPYFRWKDRFHGTTQRWWILVEDSENDHIYHSELFTLTK
RMAKGEPQKISFTIPIFEPHPAQYYIRAVSDSWLRSESLYTISFRNLTLPQTQISHTELL
DLKPLPVSSLGNEAYENLYRFSHFNPIQTQAFHVLYHSDSNVLLGAPTGSGKTISAELAM
FRLFNTQPDMKVIYIAPLKAIVRERMNDWRKRLVSQLGKRMVEMTGDFTPDLMALLSADI
IISTPEKWDGISRSWHSRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERS
IRFIGLSTALANARDLADWLGVGDAGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNK
PAYAAICTHSPSKPVLIFVSSRRQTRLTALDLIQLAASDEQPRQFLDMPEEELEMVLSQV
TDNNLRHTLQFGIGLHHAGLNDKDRSLAEELFGNNKIQILVCTSTLAWGVNLPAHLVIIK
GTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPV
ESNLREHLHDHINAEIVSGTVCHKEDAMHYLTWTYLFRRLVINPSYYGLEDAENETLNSY
LSRLVETTFEDLEDSGCIKMTEDSVEAMMLGSIASQYYLSYMTVSMFGSNIGPDTTLEVF
LHILSGASEYNELPVRHNEDKHNEELSKRVPYVVDEHHLDSPHVKANLLFQAHFSHIEFS
VSDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSAMTCMHLMQMVMQGLWYGKDSSLWML
PCMSDDLLSFLNRNGVFSVQELLNLPSRKLRLLLQQIPCPELTQELAHFPHVQAKLKLER
ENTGRTNSPVLNVKLEKLNSKHSTRRAFAPRFPKVKDEAWWLVLGNVTISELYALKRVTF
SDRMVTRIELPSTPINLQETRLILVSDCYLGFEQEYPIEEV
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtccctttacctcgcctcacgagctctctcaggccccactacgacgtcgatcaa
gcgtacctccatcgcaaatctatcctccaatctctcaaaccaaagagattgaataatgaa
tcggagctcgctcggaaacttgtcgatcgatgggatgaagcttcaaaggaggtgcgtcaa
gcgtataaacagtttcttggagctgtggtggagttgattgatggtgaagtgtactctgaa
gaatttcacgaagtagtgcaaaccatctatcatctgtatagcaatcctgacacagactct
gatacctcaaagatgcatactgagaaaaaggaagaattacagaggcttgtcggttgccct
attccagattctattcttcagagggtctcttcactagctcagaagcttttttctctacaa
cataatggtcccgaggctgcaaatggccaggcaatgatgacagatggactttgtgaaagt
aatcctgaattcggttttaaaatcacttttcaagctccggctcgctttcttctggatgtg
cctcttgaaaatggcgtcagtacaactggggatagttatactggctctagcatatttcgt
gagaaacatgactattacgtggaagctacacatcatttgaacgctgcccgagaggttgtg
aatttaagatggctgaaagatgcttgtgatctgatagttgaagggggtggttcattactt
actggtgatgaacttgcaatggccttgtgtcgggtgctcatgtctaacaaagctggtgat
gagatagcaggtgatcttttggcactcgttggggatggtgccgttgaaacagtacataat
cttttatcgcatcgaaaagaactcgttgatgctattagtcatgggctacatatgcttaaa
tctgagaaatcatcatccagcagtcaatcgaggatgcctagctacggaactcaggttact
atacagacagaatctgagcgccaactggataaacttcggcgcaaggaggaaaaacgaaat
aagcgtggggcggattatgggagcgcatatgatatggctactgatagtttttcttctttg
ctattagccagtgagaaaagacaaccgtttgatgatctgattggtactggtgaagggtta
agatcgtgtgcccttccccaaggatccacaaggttatgtgaaaaaggttatgaggaagtc
agcattccacccactccgacggcacctatgacgccagatgagaagctgattgaaataaaa
gacttagacgattttgcccaaactgcttttcacggatacaagtctcttaaccggattcag
agtcgtatttttcagacgacttaccactcaaatgagaacattctagtttgtgctccaaca
ggtgctggaaagactaatattgccatgatttctgttcttcatgagattaaacagcacttc
agggatggaattttgcataaggatgaatttaaaatagtttatgttgctccaatgaaggcg
ttagcagcggaggtgacttcgacattcagtcatcggttgtctcccttaaatcttgctgtg
aaagaactcaccggtgacatgcagctttctagaaatgagcttgaggaaacccagatgata
gtgaccactcctgaaaaatgggacgtgattactcgaaaaagcagtgatatgtcattgtca
atgttagttaaactcttaattattgatgaagtgcacctgctgaatgacgacagaggtgct
gtgattgaagctctagttgctcggactcttcgacaagtagagtcgacacagtccatgatt
cggattgttggcttatctgctacgcttccaaattataaagaggttgctcaatttttgagg
gtgaatctggcaactggtctattcttctttgattccagttatcgaccagttcctctagca
caacagtatattgggattacagagaaggatttttcaagaaagatgactttattcaacgat
atatgctataagaaggttgttaattcattgaagcaaggacatcaggccatggtttttgtt
cattcacgcaaggacacaggaaaaactgctaggatgttgcacgaactagctacaaaatat
gaggagctggagttttttattaacgacaaagatcctcaattttctttggttaagatggaa
gttagtaagtctagaaacaaggagcttgtggagttatttgattatggaattggcattcat
catgctgggatgctccgtgctgatcgaggcctgaccgagcgcctattctctcgcggcctt
ttgaaagtccttgtgtgtactgcaacattggcgtggggagtgaatctccctgctcacacg
gttatcatcaagggcacccaactatatgatccaaaggctggtggatggaaggatcttggt
atgcttgatgttatgcagatatttggtcgtgctggaagaccccagtttgacaaaagtggt
gaaggaataattattacaactcatgacaaattagcattttatttaagacttctgacgagt
caactcccaatagaaagccagttcgttacctcaatgaaagacaacttgaatgctgaggtg
gccttaggaacagtaacaaatgtcaaggaagcttgtgcatggatcggatatacttatctt
tttataaggatgaagacgaatcctttggtttatggaatttcatgggatgaggttattgca
gatcctagtttactctcaaagcaaagatcttttatagttgatgctgcacgtgctcttgac
aaagcaaagatgatgcggttcgatgagaaaagtggcaatttctactgcactgagctgggc
cgtatagcgagccatttttaccttcaatactctagtgttgagacatataatgaaatgcta
agacggcatatgaatgacagcgaagtaattaacatggttgcacattcttctgaatttgaa
aatattattgttcgagatgaagaggtggacgagctagaagctttgataaaaaagttttgc
ccgttagaagtgaagggtggacccactgataagtattggaaaatttcaatcctcattcag
gtttacatatctcgaggttcaatagatagtttctctttgatttctgatgctgcatatatt
agtgcaagcttggctcgcatcgtgcgtgctttatttgaaatctgcttgcgcagagggtgg
tgtgaaatgtcagcttttatgctggaatattgtaaagctgtagataaacagatctggcca
catcagcatcctctcaggcagtttgatagggatatttctgctgagattctgagaaaactt
gaggaacgagaagctgacttagatcatctttttgagatggaggagaaagaaattggagcg
ctaattcggttcgcccctggagggaagttggtcaaacaatacttggaatgtttcccgagc
atcaacttatctgcaaccgtgagtccaattacgagaaccgtcctcaaggttgatttgctt
ataactccctactttcgttggaaagatcgcttccacggcactactcaacgttggtggata
cttgttgaggattctgagaatgaccacatttaccattcggagctcttcactttgactaag
aggatggcaaagggggaaccacagaagatttcatttaccatacccatatttgagccgcat
ccagcacagtattatatccgtgctgtttcagactcgtggttacgttcagagtcactttac
acgatttcttttcgtaatttaacgttgcctcagacccaaatttcacacacggagcttcta
gatttgaaaccccttcctgtgagttctcttggcaatgaagcttacgaaaatctttacagg
ttttcgcatttcaatccaatccaaacacaggcatttcatgtcctataccactcagacagc
aatgttcttctaggagctcctacagggagtggaaaaacaatatctgcggagctggcaatg
tttcgtttgttcaacactcaacctgatatgaaggtgatatacatcgcacctctcaaggct
atcgttcgagaaagaatgaatgattggaggaagcgactagtttctcaacttggaaaaaga
atggtagaaatgactggggatttcactccagatcttatggcactgttgtcagctgacatc
ataatttcgactcctgagaagtgggatggcatcagccgcagttggcacagtagaagctat
gtgatgaaggttggactcatgatattggatgaaattcatttactgggggctgatcgagga
cccattcttgaggttattgtttctaggatgagatacatatcatcacaaactgaacgctca
atacgttttataggtctatcaacagcattagcaaatgcacgagatttggctgattggttg
ggagttggagatgctggtctattcaattttaagcctagtgtgaggcctgttccgcttgaa
gttcatattcagggatatccagggaagttctactgtccaagaatgaatagcatgaataaa
ccggcatatgctgcaatatgtacccattcaccttcaaaaccagtgctcatttttgtttca
tctcgacgtcaaaccagacttactgcactagatctcatccagcttgcagcatctgatgaa
cagcctagacagtttcttgatatgccagaagaagaactagaaatggttctttcacaggtt
actgacaacaacttaaggcatactctacagttcggaattggactgcatcacgctggactg
aatgacaaggatagatctttagctgaggaactttttggaaacaacaaaatccagatctta
gtatgtactagtacactggcatggggtgttaaccttccagctcatctggtcatcattaag
gggacagaatactatgatggaaaagctaaaagatacgttgattttcctataacagacatt
ttgcaaatgatgggccgtgctggtcgaccacaatatgatcagcatggaaaagctgttatt
cttgttcatgaaccaaaaaagagtttttataagaagttcctttatgaaccattccctgtt
gaaagcaatttgagggagcatttgcatgatcacatcaatgcagagattgtctctggtaca
gtctgccataaggaggatgctatgcactatcttacatggacctatctgtttcgccgattg
gttataaatccatcttattatggattggaggatgctgaaaacgagactcttaattcttat
ttgtcaagattagtggaaactactttcgaggatctggaggacagtggttgtattaagatg
actgaagattctgtggaggcaatgatgctaggttctatagcatcacagtattacctgagc
tatatgacagtatcaatgtttggttcaaacataggtccagacactactcttgaggttttt
ctgcacatcctctctggtgcttctgaatacaatgagctccctgtgaggcataatgaggac
aagcataatgaggaattatcaaaaagggtcccttatgtggtcgacgagcaccaccttgat
agtccacatgtgaaagcaaatttgctcttccaggcacacttctcccacattgaattttct
gttagtgactatgtcactgacttaaaatctgttcttgatcaaagcatacgtatcattcag
gctatgattgacatatgtgcaaatagcggatggctttcgagcgcaatgacttgcatgcat
cttatgcaaatggtcatgcagggtttatggtatgggaaagattcatccttatggatgctt
ccctgtatgtcggatgatcttctaagttttctcaacagaaatggtgtattttctgtccaa
gagctgttaaatcttcctagtagaaaattgcgactgttgcttcagcagataccttgtccc
gagctgacccaggaacttgcgcactttccgcatgtacaggcaaaattaaagcttgagagg
gaaaacacaggaagaactaattctcctgtccttaacgtaaaactggaaaagttaaattct
aagcattcaacaagaagagcatttgcccccagattcccaaaggtgaaagatgaagcatgg
tggctagtcctgggaaatgttacaatttccgaactgtatgcgctgaaaagagtaactttc
tctgatcgaatggttactcgaatagaattaccatcaacaccaatcaatctccaggaaaca
aggctaattttagtatctgactgctatcttggattcgaacaagagtatcccattgaagag
gtataa
DBGET
integrated database retrieval system
