Asparagus officinalis (garden asparagus): 109824043
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Entry
109824043 CDS
T05243
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109824043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109824043
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109824043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
E3_UBR4_N
Motif
Other DBs
NCBI-GeneID:
109824043
NCBI-ProteinID:
XP_020246154
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Position
9:complement(65106420..65114521)
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AA seq
660 aa
AA seq
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MPRKTNYGKYYEEDYDDYDDYDEHDYDELEVNSYNHGSEINNCSYSEDGHGHGKKPSLKD
KTARKSELWRCSFCTYDNDGSSLSCDMCGACQDSSVDLGNHREAAVPNYKEPSSTSISPN
EVPRSSSGSLPKPSHQNGIESSNIREKREMPQDLPGKLDNVKLDDTFTSIGNDNGIPSSS
SGFLSEPRPPNGSESRVREKTDIPHSITSKVDYTPEKWMLNYQEQGLFNQLNLAIVGHVD
SGKSTLSGRLLHLLGRISKKEMHKYEKEAKQMGKGSFAYAWAMDESSEERERGVTMTVAV
AYFDSKKYRVVLLDSPGHKDFVSNMISGATQADAAVLVVDASKGSFEAGMDGIGIGQTKE
HAQLIRSFGVEQLIVAVNKMDTVEFSKERFDFIKLQLGSFLRSCGFKESSVTWVPLSAME
NQNLVSSASDKRLISWFQGPCLLDAIDSLQPPLRDISKPLRMPICDVTKFQSQGQLAASG
KLEAGAVKNGSKVLLMPSGELATVRSIERDSYACSVARAGDNVAISLQGIDWSHVMPGGV
LCHPDFPVAVATSLELRIIVLDITVPILIGSQVEFHIHHAKEAARVVKIISLLDQKTGKV
SKKLPRILKAKQSAVIEVALDEAVCVEEFSKCRALGRVFLRSSGNTVAVGVVTRVFERGS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaagacaaattatggaaaatactacgaggaagactatgatgattatgatgat
tatgatgagcacgactatgatgaattggaagtgaatagttataatcatggcagtgaaata
aataattgctcttattccgaagatgggcatggtcatggaaaaaagccatccctgaaagat
aagacagctaggaagtctgagctttggcgttgttcattttgcacgtatgataatgacgga
agctcattatcttgcgacatgtgtggagcttgtcaagattcctctgttgatttaggcaac
catagggaagctgccgttcctaactacaaagaaccttcatctactagtatttcacccaat
gaagtaccaagaagttcatctggatctttacctaaaccgagtcatcagaatggaattgag
agcagcaatatcagggagaaaagagagatgccacaggatctacctggcaagctcgacaat
gtgaagttggacgatactttcacaagtattggaaatgataatggaataccgagcagttct
tctgggtttttatctgaaccgagacctcccaatggatctgagagcagggtcagggagaaa
actgatattccacatagcataacaagcaaggttgactatacgccggagaaatggatgttg
aattaccaagagcaaggactcttcaatcagttgaatcttgcaatagtgggccatgttgat
tctgggaaatccacattatcaggtaggctgctacatctattgggtcgaatatctaagaaa
gaaatgcacaaatatgagaaggaggcgaaacaaatgggaaagggatcatttgcttatgca
tgggcgatggatgaaagttctgaagagagggaaaggggtgtaacaatgacagtggctgtt
gcatattttgactccaaaaagtaccgggtggttttgctggattccccaggacataaagat
tttgtatcaaatatgatatccggtgctacacaagcagatgctgctgttcttgttgttgat
gcttccaaaggatcctttgaagcaggtatggatggtattggcattggacaaacaaaggaa
catgctcaacttattcggagttttggtgtcgagcaacttattgttgctgtcaataagatg
gataccgtggaattctctaaggaaagatttgattttattaaattgcaacttggttctttc
ctccgttcctgtggattcaaggaatcatctgtcacttgggttccacttagtgccatggaa
aatcagaatttggtgtcaagtgcttcagacaagcgtttgatatcttggtttcaggggcca
tgccttttggatgcaatagattccctgcaacctcccctgcgggatatttcaaagccactt
cgtatgcctatctgtgatgtgaccaagtttcaatcacaggggcagcttgctgccagtggg
aagcttgaggccggtgctgttaaaaatggttcaaaggttttgttgatgccttcaggagag
ttggctactgtgcgatctattgagcgtgactcatatgcttgttctgtagcacgagctggg
gacaacgtcgctatcagtttgcagggaattgactggagccatgtaatgccaggtggcgtg
ctgtgccaccctgattttcctgttgctgtagcgacctctttggaattgaggattattgtc
ttggacattactgtaccaattctaattggatctcaggttgagtttcatattcaccatgca
aaggaggcagcaagagtagttaagataatctctctccttgatcaaaaaaccgggaaggtc
tctaagaaattaccgcgcatcctcaaagccaaacaaagtgctgttattgaggtggctttg
gatgaagcagtttgtgtcgaagagttctcaaaatgtcgagcccttggaagggtattcctt
cgatcttcaggaaataccgttgcagttggtgttgtgactcgagtatttgagcgtggttca
taa
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