Asparagus officinalis (garden asparagus): 109824349
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Entry
109824349 CDS
T05243
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109824349
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
General mRNP proteins
109824349
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
RRM_8
Motif
Other DBs
NCBI-GeneID:
109824349
NCBI-ProteinID:
XP_020246515
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All DBs
Position
9:complement(2492901..2504719)
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AA seq
561 aa
AA seq
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MDFDEYDYLEKTVEDVEIPKEKRKDDYRKDEKGSRHRERDAGESRSERKSSRSGEENGDS
KREDRDRSDRSRDKDRDEGRDRRRDREREREKDRDRERRSRDRDYKDKDKGRDRERDREK
DRERETERERETSRSRRSSSRSRHEAEREMERARSRERAVRERELEREIRERESRRFKEK
KEAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYI
EFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTATGGTGVTGAGAARKIYVGNL
HFNISEDQLRQVFEPFGPVELVQLPLDLETGQCKGYGFVQFAQMEHAKAAQSLNGKLEIA
GRVIKVSAVTDHVAVQETGANTADFDDDDGGGLSLNARSRAMLMQKLDRTGTASSIAESL
GVPLVNGVAQPNQQALPLPANGQAILPVAPALVTNPHASVPIGEPSECIQLKNMFDPRTE
TDPDFDLDIRDEVQDECSKFGPVKHIYVDKHSDGHVYLRFETVTAAASCQHAMHMRWFAG
RAICATFMQPYEYEAKFAGGA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgattacttggagaaaacagtggaggacgtcgagatccccaag
gagaagaggaaggacgactacagaaaggacgagaagggctcccgccaccgggagagggac
gccggagagagcagatcggagaggaagtcgtcgaggtcgggggaagagaacggcgatagc
aagcgcgaggaccgggaccgatccgatcgcagcagagacaaggatagggacgagggcaga
gaccgtcggagagaccgcgagcgcgagcgggagaaggatagggaccgagagcgcaggagt
agggatagggattataaggataaggataaggggagggatagagagagggatagagagaag
gatagggagagggaaacggagagggagagggagacgtcgaggtcgaggaggagcagcagt
agatcgaggcatgaggccgagagggagatggagagggcgaggagcagggagagggcggtt
cgagagagggagctggagcgcgagattagggaaagggagagcaggagattcaaagagaaa
aaagaagctgaaccagaagctgatccagaaagggaccagaggactgtttttgcttatcag
atgcccttgaaggctactgaaagagatgtttatgagttcttctcgaaagccggaaaggtt
agagatgtacggttgatcatggatcgaaactcaagacgatctaaaggagttgggtatatt
gagttttatgatgcaatgtcagtgccgatggcaatagctttgagtggtcaacttctttta
ggtcaacctgtgatggtcaaaccatcagaagcagaaaagaatcttgttcaatctaccgca
acaggaggtacaggtgttacaggagctggagctgctaggaaaatttatgttggcaatctg
catttcaacatttcagaagatcaacttcgtcaggtctttgaaccgtttggtcctgttgaa
cttgtacaactacctctggatctggagacaggacagtgcaaaggttatggttttgttcaa
tttgcccaaatggaacatgcgaaggcagctcaaagtttgaatggaaagctagagatagct
gggcgggtcattaaggtgtcagctgtcacagatcatgtcgctgtgcaggaaactggagca
aacaccgctgattttgatgatgacgatggtggtggtttgtccttgaatgctcggtcaaga
gccatgcttatgcagaaacttgatcgcacaggaacagcttcaagtattgctgagtcactt
ggagtacccttggttaatggggttgcccaaccaaatcagcaggcattacccttgccggca
aatgggcaagctatactacctgtagctcctgcattagttactaatccgcatgcttccgtg
ccaattggagaacctagtgaatgcattcaactaaagaatatgtttgatccgaggactgag
acggacccggattttgatttggatatcagagatgaagtgcaagatgaatgctccaagttt
ggcccagtgaagcatatttatgtggacaaacacagtgatggacatgtgtatctacgattt
gagactgtgacagcagcagctagctgtcagcatgcaatgcatatgagatggtttgctgga
agggcaatatgtgccaccttcatgcaaccttacgagtacgaggccaaatttgcgggtgga
gcttga
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integrated database retrieval system
