KEGG   Asparagus officinalis (garden asparagus): 109824418
Entry
109824418         CDS       T05243                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109824418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109824418
   03041 Spliceosome [BR:aof03041]
    109824418
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109824418
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109824418
Spliceosome [BR:aof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109824418
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35 BRAP2
Other DBs
NCBI-GeneID: 109824418
NCBI-ProteinID: XP_020246639
LinkDB
Position
1:131344807..131349977
AA seq 364 aa
MPKDARISEHDGASPGKIFIGGLPRDLSSSAFVRHFEKYGTIIDHVIMKDRHTQQPRGFG
FITFEDPSVVDTVIEDTHVFNGKTVEIKRTIPKGAAQTKDFKTKKIFVGGIPTTVEEDEL
KSFFSKFGKVVEHEIIRDHSTKRSRGFGFIIFDSEQAVDDMLAKGNMIDFAGSQVEVKKA
EPKKSSNPPPPFASEPRGRSFGGGLAGYSNSYNSFGGGEFGPSYRTPGGLGPRIGEYGSY
GSGAGEFGGGYSGGLGDYRGESSLAYSRRFSSYGGYGAGGYGGGYGRDEGFGGYGGSSYG
GSSYAGGRFDSGTGSSYGAGAGYDTGSSYGGPSFGSGSALFGGRGGGYGGGGAGPSGRYH
PYAR
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgccgaaggacgccaggatctcagagcacgatggagcgagccctgggaagatatttatt
ggagggcttcctagagatctgagctcaagtgcctttgtgcgacattttgagaagtatggg
actattatagaccatgtgataatgaaggatcgtcacactcagcagcctaggggttttggg
tttatcacttttgaggatccttctgttgttgatacagtcattgaggacacacatgtattc
aatggaaaaacagttgaaatcaaaaggacaattccaaaaggtgctgctcaaacaaaggac
tttaaaacaaagaaaatttttgttggtgggataccgactactgtggaagaagacgaattg
aagagcttcttttccaagtttggcaaagtagtggagcatgagatcatccgtgaccatagt
actaagcggtcacgaggctttgggtttataatctttgactctgagcaagctgtagatgat
atgttagcgaagggcaatatgattgattttgctggtagtcaggttgaggtcaagaaggct
gaaccaaagaaatcttcaaaccctccacctccatttgctagtgaacctaggggccgctct
tttggcggtggtcttgctggatatagcaactcttacaatagttttggtggtggtgagttt
ggtccatcttataggacacctggagggcttggtcctaggattggtgaatatggcagttat
ggcagtggtgcaggtgaatttggtggtggttatagtggtggcttaggagattacagggga
gaatcctctcttgcttactctaggcgctttagtagttacggaggttacggtgctggtggt
tacggtggtgggtatgggcgtgatgagggctttggtggatatggtggttctagctatggt
ggttctagctatgcaggtggtcgttttgattcaggtacaggttctagctatggtgctggt
gctggttatgatacaggttctagctatggcggtcctagctttggatccggcagcgcgctt
tttggcggtaggggaggaggctatggtggtggtggtgctggtccttctggcagataccat
ccttatgcaaggtag

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