Asparagus officinalis (garden asparagus): 109824540
Help
Entry
109824540 CDS
T05243
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g62350-like isoform X1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00520
Amino sugar and nucleotide sugar metabolism
aof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
109824540
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
109824540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_3
PPR_1
PPR_long
TPR_24
Exog_C
DUF5025
Motif
Other DBs
NCBI-GeneID:
109824540
NCBI-ProteinID:
XP_020246752
LinkDB
All DBs
Position
9:complement(13310549..13314071)
Genome browser
AA seq
256 aa
AA seq
DB search
MESVLLGPPSSSFLQLPKLHLHDKPRPSNPPSTICCGLRKSSREPLWRRKVMSTEAIQAV
QALKIAKSSQSRDPSSPSFPSSRLGEVFSNRIGRLIKGDLVAVLGELQRQNEWEIALQVF
DFMRNEDTFRLDLSLYGDMILMLGKNKLIEIAEKLLSELKKEGLQPDTRIYNEMIGAYLK
VGMIDKAMNTYKIMKDSGCNPDRLTLTILIRNLDKAGEEELASFVKKDCEKYVEYPERFL
EEINKTYPQRRSVKLV
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagttctcctaggtcctccttcctcctccttcctccaactcccaaaactccac
ctccatgacaagcctcggccctctaatcccccctccacaatctgctgcgggctgaggaaa
tcatcaagagaacctctctggcgacgaaaagtcatgtccacagaggcaatccaagccgtt
caagctctcaagatcgccaaatcctcacaatctagagacccgtcatcaccctcttttcct
tcgtcgagattgggtgaagtgtttagtaacaggattgggaggttgatcaagggggatttg
gtggccgtgctcggggagctgcagaggcagaatgagtgggagattgcgcttcaggtcttt
gacttcatgagaaacgaggatacattcagacttgatctatctctctacggcgacatgatc
ctaatgttgggtaaaaacaagctgattgaaatagctgaaaagctactatcagaactgaag
aaagaaggtttacagccagatacaagaatatacaatgaaatgataggtgcctatttaaaa
gttggaatgatcgacaaagcaatgaatacatacaaaattatgaaggactcagggtgcaat
cctgatagattgacactaaccatattaataaggaaccttgacaaagctggagaagaagag
cttgcgagttttgtgaagaaggattgtgaaaaatacgtggagtacccggagagatttcta
gaagaaatcaacaagacatatccacaaaggagatcagtcaaactagtttga
DBGET
integrated database retrieval system
