Asparagus officinalis (garden asparagus): 109824897
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Entry
109824897 CDS
T05243
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109824897
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109824897
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109824897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
PCP_red
DUF6274
Motif
Other DBs
NCBI-GeneID:
109824897
NCBI-ProteinID:
XP_020247117
LinkDB
All DBs
Position
10:11609678..11623988
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AA seq
185 aa
AA seq
DB search
MESPPENDVCSVCHDVFSLPCQANCSHWFCGHCILRVWHHGSALQPCKCPICRRFITLLV
PAEAAQHQRHEPEASRVLENIEKYNRLFGGGSRSLVQRLRDLPFFIRRMIREFMDPQRSL
PLVFRARMIFAMALSGVYVLSPVDILPEGVLGLVGLLDDFLILLIVFLHLAAIYRSLLLY
RHGGH
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgccgccggagaacgacgtgtgctccgtttgccacgacgtcttcagcctccct
tgccaagccaactgctcccattggttctgtgggcattgtatactgagagtgtggcatcat
gggtctgcacttcagccttgcaagtgccccatttgtcgccggtttattactttattggta
cctgcagaagctgcacagcatcaacgccatgagccagaagctagtcgggtactggagaac
atagagaagtacaaccgtttgtttggcggaggctcgagaagtcttgtgcagaggttgcgg
gaccttccttttttcattcgaaggatgataagagaatttatggatcctcaaagatccctt
ccacttgtttttagggcgcggatgatatttgcaatggcactcagtggagtctatgtcttg
agcccagtggacatacttccagaaggagttcttgggctggtgggtttactggatgatttc
ctcatactgttaattgttttccttcatctggctgctatataccggtctttacttctttat
cgacatggaggccattga
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integrated database retrieval system
