Asparagus officinalis (garden asparagus): 109825013
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Entry
109825013 CDS
T05243
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109825013
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109825013
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
CCDC154
PspA_IM30
DUF1090
TEX13
Motif
Other DBs
NCBI-GeneID:
109825013
NCBI-ProteinID:
XP_020247268
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All DBs
Position
10:8316815..8327733
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AA seq
444 aa
AA seq
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MNGEGTFNSHILVDKLAKLNSTQQSIETLSHWCIFHRKNAKQVVETWERQFYCSPKDQRV
SFLYLANDILQNSRRKGMEFVGEFYKVLPDALSDAIENGGEFGRKTALRLVDIWEERKVF
SLRGQTLKEDFLGRNRNGKNISYKLKQPSGHMLEKLTSSYHDVYNGCDEDTLFGKCSTAI
SSVEKVEKEMGNDLGNINESGVADELLAQQALLKECIEQMKAAESSRTTLVSHLREALNE
QEFKIEELRTQLQVAQVRYDQVGSLLLGQAPALPLPCQNIDEIPPPPPASAYSEAPPPPD
FPPESPTNPTVEKSLPTNGEQQTVASNASGQSISYVLSSLVSDGVIGQPTSEEDHPDASK
RPRLNNGNLGSVPCFLPQPMLSPTLPLVTPFTYGPPPVPPMPGFPVVGIPPYPGPMNPFQ
FQGSDGGFFVQPQYPAGLPPSSQQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaggggacttttaattcacatattttggttgataaacttgctaaacttaac
agtacacaacagagcattgagactttatcacattggtgtatcttccatagaaagaatgca
aaacaagttgtggagacgtgggaacgacaattctattgttctccaaaagaccaacgagtg
tcttttctttatcttgcaaatgatattttgcagaatagtcggcggaagggtatggaattt
gttggggaattttataaagttcttcctgatgcactaagtgatgcaattgagaatggcggt
gagtttgggaggaaaactgcgctgagattggttgatatatgggaagaacgtaaagtcttt
agtcttcgtgggcagactttaaaggaagactttttgggaaggaacagaaatggaaagaat
atcagttacaaactgaaacaaccatctggacatatgcttgaaaagcttacttcaagttat
catgatgtttataatggttgtgatgaagatacgttatttggaaaatgtagcacagctatt
agctcagtcgaaaaggttgaaaaggaaatgggaaatgacttaggtaacatcaacgaatct
ggagttgcagacgagttgttagcgcagcaagccctactgaaagaatgcatagaacaaatg
aaagcagctgaatcatctagaacaacattggtgtcccatttacgagaagcacttaatgag
caggagttcaagattgaagaactgcgaacgcaacttcaggttgcccaagtgcgctatgat
caagttggaagcctcttgcttggacaggcgccagctttgccgcttccttgccaaaatatt
gacgaaataccaccgcctccacctgcttcagcctactctgaagctcctccgcctcctgat
ttccctccagaatctccaaccaacccaacggtagaaaaatcgctgccgacaaatggagag
cagcagacagtggcatccaatgcctcaggacagagcatcagctatgtgctctcctctctg
gtatcagacggtgtcattggccagcccacgagcgaggaggatcatcctgatgctagcaag
aggccgaggctcaataatgggaaccttggaagtgtgccttgtttcttgcctcagccgatg
ctttcacctacacttccgctggtgactccgtttacctatggaccaccaccagtgccgcct
atgccaggttttccagtggttggcattcctccgtatccaggccctatgaatcctttccag
tttcagggatcggacggtggtttctttgttcagccacagtatccggctggcctcccgccg
agctcccagcaatag
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