Asparagus officinalis (garden asparagus): 109825100
Help
Entry
109825100 CDS
T05243
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109825100
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109825100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
DUF1631
MOEP19
Motif
Other DBs
NCBI-GeneID:
109825100
NCBI-ProteinID:
XP_020247416
LinkDB
All DBs
Position
10:complement(19534258..19556140)
Genome browser
AA seq
415 aa
AA seq
DB search
MVVPVVKVGSLIGKKGELIKKLCEETRAKVRILDGVSGTTDRIVLIFGKEEPEEELSPAM
NAVIRVFKRVNDVSDAGGDGTAQASSNPTACSVRLLVPSQQAISLIGKQGSSIKSIQENS
GATIRIITGDKLPHYATEEERVVDIQGETLKVLKALEAVLEHLRKFLVDHSIVPLFEKSP
NAPLAQAQAQAQAQGQPQSQDSQPQSQAGIQNPWSNKAQSLIHAAQQSGIGSEYTLPLTR
DSLFLERDSHFDSQMERPGGLSSLYRPEPPLSGLHPPGPLRSAAALVTQVTQTMQIPLTY
AEDIIGIGGGNIAYIRRTSGAVLTVQESGGLADEITVEIKGTSNQVQTAQQLIQDFISGH
KEAPVSSYGGLDTGLRSSSYSRIGSSAYSAYPSSSLPSQYGGYDSGLGGYRDYRF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggtggttccggtggttaaagttgggagcttgattgggaagaaaggggaactcatcaag
aagttgtgcgaggagactcgtgcgaaggttcggattcttgatggcgtttccgggactacg
gatcggattgttctgattttcgggaaagaagagccagaagaagaattatctcctgcaatg
aatgctgtgattcgagtattcaagcgtgttaatgatgtctctgacgctggaggtgatggt
acagctcaagcatcttccaatcctacagcatgttcagttagattgctggtgccatcacaa
caggccattagtttgattgggaaacaaggaagttcaattaagtcaattcaggagaattct
ggtgccacaatacgaattattactggagacaagttgccgcattatgctaccgaggaagaa
agagtggttgacattcaaggtgaaactttgaaggttctcaaggcacttgaagctgtgctt
gagcatcttcggaaatttttggttgatcatagtattgtgcctttatttgaaaaaagtccc
aatgcaccacttgctcaggcccaggcccaggcccaggctcaaggtcaacctcaatctcag
gattctcaacctcaatctcaggctggcatacaaaatccttggagtaataaagctcaatca
ttgatacatgctgctcagcaatctggcataggcagtgaatatacactcccattgacacgg
gattctctatttctggaacgtgattcccattttgattcacaaatggaacgtcctggtggg
ctgtcttcactttatcgaccagaacctcctttgtctggactgcatcccccaggaccccta
cggagtgctgctgctttagttactcaggtgacacaaacaatgcaaataccactcacgtat
gcagaagacatcattggtattggaggaggcaacattgcatacatccgtcgcaccagtgga
gctgttcttactgttcaggagagtggaggtttggctgatgagattacagttgagatcaaa
ggcacttctaatcaagttcagactgctcagcagctcatccaggattttatatcgggacac
aaagaagcaccagtgagtagctatggaggtcttgatacaggcctcaggtcatcatcctat
tctcgtatcggaagttcggcatattcagcatatccatcatcatctcttccatcgcaatat
ggtggatatgattctggattgggaggatacagggactacaggttttaa
DBGET
integrated database retrieval system
