Asparagus officinalis (garden asparagus): 109825128
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Entry
109825128 CDS
T05243
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109825128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109825128
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109825128
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GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
109825128
NCBI-ProteinID:
XP_020247449
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Position
10:complement(47257160..47269268)
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AA seq
369 aa
AA seq
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MVSGRPVTGNLDFWFRNLVVGDSKGNVEGMALSGWKDLPMELLLRIVSLSDDRTVIVASG
VCTGWRDAISAGLARLCLSWCKDNMNNLVLSLAPKFMRLQALSLRQNKPQLVDDGVETIA
NYCHDLRDLDLSKSLRLSDRSLYALAHGCPRLVKLNISGCSAFSDSGLAYLTGFCRNLKY
LNLCGCVRAASDRALQAIALNCGQMQTLNLGWCEAVSDKGVVSLALGCPDLRAVDLCGCI
LITDESVIALANGCPDLRSLSLYYCHNITDRAMYSLAANSRLKSTHELWDSVHLKSTHSK
EKEGLMNLNVSQCTALTPNAVQAVCDSFPSLHTCPGRHSLIISGCLSLTSVHCACAVQAH
HRGGGVGAL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtgggagaccagtaactgggaatttagatttttggtttagaaacctcgtggtt
ggtgatagcaagggaaacgtggaaggaatggccttgagtggatggaaggatcttccaatg
gaactcttattgaggattgtttcgctcagtgatgatcggactgttatcgttgcatcgggg
gtctgcactgggtggagagatgcaatttctgcgggattggcacgcctctgtctgtcatgg
tgcaaagataacatgaacaatcttgtgctatcgttggctccaaaatttatgaggcttcag
gctctatctttgcgtcagaacaaacctcaacttgtggatgatggcgtagagactattgca
aattactgtcatgatttgcgagacttagacctaagcaagagcctcaggcttagcgaccgt
tcattgtatgccttagctcatgggtgccctcgccttgtaaaactcaatatcagcggttgt
tcagccttcagtgattctggtcttgcatacttaacgggtttctgcagaaacctaaagtat
ctgaatctctgtggatgtgtgcgagctgcgtctgacagagccttgcaggccattgcactt
aattgtggtcagatgcaaacattaaatttgggatggtgtgaggctgtgagtgataaaggt
gtagtaagcttggcattaggatgtcctgatctgagagctgtagacttgtgtggctgcatc
cttataacagatgaaagtgttattgctttggcaaatggctgtcccgacttgagatcctta
agcttgtactactgtcacaacataactgatagggcaatgtattcactggcagcaaacagc
cgactgaaaagcacgcatgagttatgggattcagtccatcttaaaagtactcacagcaaa
gaaaaggaggggctaatgaacctcaacgtcagccagtgcacagctctgacccctaatgct
gttcaggcagtgtgtgactcgtttccttcgctccacacttgccctgggaggcactcactc
atcatcagcggctgtcttagtcttacatccgtacactgtgcttgtgcagtccaggctcat
catcgtggtggtggagtcggtgctctctga
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