Asparagus officinalis (garden asparagus): 109825191
Help
Entry
109825191 CDS
T05243
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03022
Basal transcription factors
aof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109825191
09124 Replication and repair
03420 Nucleotide excision repair
109825191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109825191
03400 DNA repair and recombination proteins [BR:
aof03400
]
109825191
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109825191
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109825191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
109825191
NCBI-ProteinID:
XP_020247553
LinkDB
All DBs
Position
10:60369022..60394192
Genome browser
AA seq
451 aa
AA seq
DB search
MPQVRIVARNFMDMVAALPAVKLDKLYESSFICEAVLRSLPPLAKKYVLQMLFIDSPVTA
KFMEEWVLADGYSKHKVAIDRLLQLRVFIEANDRKKENSYKMNPKFQSNMQKYLVHGGTL
SREPMSSNITGRLPSLEDLEAYALEQWECFLLQLISSAQVERVTNFSSSMMRVFQRGLLS
SRENEAVRLTENGFQFLLMDTNAQLWYIVREYISSSEDRGVDPTELISFLLELSFHTMGK
AYNLSTLTDVQRNAIKDLASLGLVKLQQGRKESWFIPTKLATNLSVSLSDTSARKQGYVV
VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGSITKESLYNAFENGITSDQIISFL
QQNAHPRVAEKTPAIPENVTDQIRLWEGDRNRVDLIPSHLYEDFPSKDVFEAACDFAREL
GGLLWEDSKKMRLIVDGDLHQHMRDFLRRQK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagttcgtatcgtcgcgagaaacttcatggacatggtggctgctctccctgct
gttaagcttgacaaactctacgagagctcctttatctgtgaagccgtcctcaggtctctc
ccgcctctagcgaagaagtatgttctacaaatgttatttattgattcgccagtgacagcc
aagtttatggaagagtgggtgctagcagatggatattctaagcacaaagtggcgattgat
aggttacttcaactgagggtttttattgaggccaatgacaggaaaaaagagaacagttac
aagatgaacccaaaatttcagagcaatatgcagaaatacttggtccatggtggaactcta
tctagagagccaatgtcctccaatatcacagggagattgccaagcttagaggatctagag
gcctatgctcttgagcaatgggagtgtttcttgttgcaactcataagctcagctcaagtg
gagagggtaacgaatttcagctcctctatgatgcgagtttttcagcgaggtcttttgagt
tcaagggaaaatgaagctgtgaggttaactgagaatggctttcagttcctgctgatggat
acaaatgcccaattatggtacatagtaagggaatatatctcatcttcagaggatcgtggt
gtggacccaacagaactaatatcatttctgcttgagcttagttttcataccatgggcaag
gcatataacttgagtacgttgactgatgtgcaaagaaatgctataaaagatcttgcaagc
ctgggactagtcaaacttcaacagggaagaaaagaaagctggtttatacctactaagtta
gctaccaatctgtcagttagcttgtctgatacatcagcacgcaagcagggatatgtagtg
gtggaaacgaatttcagaatgtatgcttactcgacatcgaaactgcattgtgaaattttg
cgtttgttctcaaggatagagtatcaacttccaaaccttattgttggatctataacaaaa
gaaagtttatacaatgctttcgaaaatggaattacttccgatcagattatttctttcctt
cagcagaatgcacatcctcgagttgctgagaagacaccggcaattccagaaaatgttact
gatcagattagattgtgggaaggggaccgaaacagagttgacttgattccatctcatctg
tacgaagatttcccatccaaggatgtatttgaagcagcttgtgactttgcaagggaactt
ggtggcttgttgtgggaagactcaaagaagatgagattgattgttgatggagatctacac
caacatatgagggattttctcaggcgacagaaataa
DBGET
integrated database retrieval system
