Asparagus officinalis (garden asparagus): 109825222
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Entry
109825222 CDS
T05243
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109825222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aof02000
]
109825222
04147 Exosome [BR:
aof04147
]
109825222
04090 CD molecules [BR:
aof04090
]
109825222
Enzymes [BR:
aof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
109825222
Transporters [BR:
aof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109825222
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109825222
CD molecules [BR:
aof04090
]
Proteins
109825222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_29
AAA_22
DUF87
AAA_16
Zeta_toxin
AAA_15
RsgA_GTPase
AAA_14
AAA_19
AAA_21
AAA_23
DUF4258
FtsK_SpoIIIE
ADC
Motif
Other DBs
NCBI-GeneID:
109825222
NCBI-ProteinID:
XP_020247604
LinkDB
All DBs
Position
10:1618384..1636929
Genome browser
AA seq
1070 aa
AA seq
DB search
MHYITRFITGFAIGFARVWQISLVTLSIVPLIAIAGGIYAYVAVGLIARVRKSYVKAGEI
AEEVIGNVRTVQAFVGEEKALKSYKNALVNTYKYGRKGGLAKGLGLGSLHCVLFFSWALL
TWFTSIVVHKGIANGGEAFTTMLNVVIAGLSLGLAGPNVSTFLRARTAAYPIFEMIERSA
ARETSSRLRKTTLPNLDGHIELRDVSFAYPSRPDVRVFHNLNLDIQSGKIVALVGGSGSG
KSTVISLIERFYEPLSGVILLDGHDIKDLDLKWLRQQTGLVNQEPALFATSIRENILYGK
DDATFDEINHAAKLSGAITFINNLPDQYETQVGERGVQLSGGQKQRLAISRAILKNPSIL
LLDEATSALDAESERSVQEALDRVMVGRTTIIVAHRLSTIRNADIIAVVQGGKIIETGNH
EQLILDPQSAYASLVKLQDAAVQQSPPSEDANIGRPQSKTTSLGASFRSDKDSVSCFVPE
EIGPSKAKPVSMKRLYSMIAPDWLFGVTGTLAAFVTGAQMPLFALGVTQALISYYMDWET
TQREVKKIALLFCSGAVVTVISHAIEHMNFGIMGERLTLRVREKMLEAILQNEIGWFDHA
SNNSAILSSRLETDATLLKTIAVDRSAILLQNIGMIVTSLIIAFIINWRITLVVLATYPL
LVTGHIAEKLFLKGFGGNLSNTYLKANMLAAEAVSNIRTVAAFCSEEKVISLYSRELEGP
SKQSFRRGQAAGIFFGVSQFFLFSSYALALWYGSVLMGRELAGFGSIMKSFMILIVTALS
MGETLAMAPDIIKGNKMVASVFEVLDRESEVSGDAGGDIEKVKGVIEMRRVEFQYPSRPD
VMIFKEFDMRVNAGKSMALVGTSGSGKSTVLALILRFYDPTAGKIMIDGKDIKKIKLKAL
RKHIGLVQQEPALFATTIYDNILYGKDGAAESEVIEAAKLANAHSFISALPEGYSTRVGE
RGVQLSGGQKQRVAIARAIIKNPAILLLDEATSALDLESEKVVQQALDHVMRGRTTLMVA
HRLSTIQNADIISVLQNGKIIEQGNHSTLVEDRQGAYFKLINLQQGQQQQ
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcactacataacccgattcatcaccgggtttgccattggatttgctcgtgtctggcaa
atcagcctcgtaaccctctcgattgtccctctcattgccatcgccggaggtatctatgcc
tatgttgccgttgggctcattgcccgtgttcgaaaatcttacgtgaaggccggagagatt
gccgaagaggttattgggaatgttaggacagtgcaagcgtttgtgggggaagagaaggca
ttaaagagttataagaacgcactagtgaatacatacaagtatggcaggaaggggggtttg
gcgaagggacttgggcttggatcattgcattgtgttctgttcttctcgtgggcgttgctc
acttggttcactagtattgttgttcataagggcatagcgaatggaggagaagcattcaca
acgatgctcaacgttgtcattgcaggactgtcactaggtctagcagggccaaatgtctcc
acattcctcagagcaagaaccgctgcgtaccccatttttgagatgatagaaaggagcgcg
gctagggaaacaagttcaaggttgaggaaaactactctgcctaatcttgatggtcatata
gaacttcgtgatgttagcttcgcatatccttcgcgtccagatgttcgtgtatttcacaat
cttaatcttgacatacaatctgggaaaattgttgctcttgttggtgggagtgggtcggga
aagagcacggtaatatcgctgattgagcggttctacgagcccctttctggagtcatactt
ttggatggacacgacatcaaggatttggacctcaagtggttgaggcagcagactggtttg
gtcaatcaggagccagccctttttgccacaagcatccgagagaacatactctacggaaaa
gatgatgcaacctttgatgagatcaaccatgctgctaaactttcgggggctataactttc
atcaacaacctacctgatcaatatgaaacacaggttggcgagcgaggtgtccaattgtct
ggtgggcaaaagcaacggttagcaatatcgagagccatactgaaaaacccctcaattctt
ctcctcgacgaggctacaagtgcacttgatgccgagtcagaaaggagcgttcaggaggca
cttgaccgtgtcatggtcggtcgaaccacaatcatagtagcccataggttgtccactata
aggaacgcagacatcattgctgtggttcaaggagggaagatcatagagactggaaaccat
gaacagctcattctggatcctcagagcgcctatgcctcccttgttaaactccaagatgct
gccgttcagcaatcacccccctctgaggatgcgaacattggccgacctcaaagtaaaaca
actagtttaggggcaagctttcgctctgacaaggactctgtcagttgctttgttcctgaa
gaaattggtccttcgaaggcaaagcctgtctctatgaaaaggttgtattctatgatagct
cctgattggctatttggtgttactgggaccctagctgcatttgtaactggtgcccagatg
ccactctttgccctcggagtaactcaagctctcatttcctattacatggattgggaaacc
acacagagggaagtgaagaagattgcactcctcttctgcagtggtgctgtcgttacggtg
atttctcacgccattgagcacatgaattttggtatcatgggtgaaagacttacactgcgc
gtccgagagaagatgcttgaagcaattctgcaaaatgagattggatggtttgatcatgcg
agtaataacagcgcaattttgtcctctcggcttgaaactgatgcaaccctgcttaaaact
atagctgttgatcgctcagctatcctccttcaaaacataggaatgatagtaacatcactc
ataattgcattcatcattaattggaggataactcttgtggttctggctacttacccgttg
ttggtcaccggtcatatcgctgagaagctgtttctgaaaggatttggagggaacttgagc
aacacctacttaaaagcaaacatgcttgctgcggaggccgtgagcaacatcaggacagtt
gctgccttttgctcagaggagaaggttatcagcctatattccagagagctcgaggggccg
tcaaagcagtctttccgccgtggtcaggctgcaggcatcttttttggtgtttctcagttc
ttcctcttttcgtcctacgccctggctttgtggtacggctcagtcctcatgggcagagag
cttgcaggattcggttctatcatgaaatccttcatgatcctgatcgtgactgcactatcc
atgggagagactttggcgatggctccagatatcatcaaaggaaataaaatggtagcttcg
gtgtttgaggttttggaccgcgagagtgaagtctcgggtgatgctgggggtgatatagag
aaggtgaaaggagtaatcgagatgaggagggtcgagttccagtacccttcaaggcctgat
gtcatgattttcaaagagtttgatatgagggtgaatgctgggaagagcatggcactggtg
ggcacaagtggttcaggcaaaagtacagtgctggcactgatactaagattctatgatcca
acagccggaaaaattatgattgatggtaaagacatcaaaaaaattaaactcaaggccctt
cggaaacacattggacttgtccaacaggagccggcactctttgctaccaccatttatgat
aacatcctctacggaaaggatggtgccgcggaatcagaggtcattgaggcagcgaaactt
gcaaatgcacactccttcatcagtgctctgcctgaaggctactcaactagagttggcgag
cgtggggtccagctatctggggggcagaagcagcgggttgccatcgcgcgagccatcata
aagaatcccgcaatattgcttcttgatgaggcaaccagtgcgcttgaccttgagtctgag
aaagttgtccagcaggcgctggatcacgtcatgagaggccgaaccactctcatggttgct
catcggctttccaccatccaaaatgctgatatcatctcggtacttcagaatgggaagatc
atagagcaaggaaaccattctacactcgtggaggataggcagggggcttatttcaagttg
ataaaccttcagcagggtcaacaacaacagtag
DBGET
integrated database retrieval system
