Asparagus officinalis (garden asparagus): 109825241
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Entry
109825241 CDS
T05243
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109825241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109825241
Spliceosome [BR:
aof03041
]
Complex C
Other components
Step II factors
109825241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
109825241
NCBI-ProteinID:
XP_020247634
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All DBs
Position
10:complement(73121780..73126573)
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AA seq
537 aa
AA seq
DB search
MATASVSFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKAWYDRGAKIYQADRYRKGACENCGAMTHDKKSCMDRPRKLGAKW
TSMHIAPDEKVETFELDYDGKRDRWNGYDASTYAHIIERYEARDEARRKYLKEQQLKKLE
EKNKNESGGEGSASDEDDDEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLR
IREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDSDPNEKFYEGDNQYRVSGQAMEFKQLN
IHAWEAFEKGQDIHMQAAPSQAELLFKNYKVIKEKLKSKTKDMIMEKYGNAASDEALPKE
LLLGQSEREVEYDRAGRIIKGXXXXXXXXXXXXXVYINNHTSVWGSWWKDHQWGYLCCKQ
LIRNSYCTGSAGIEAAEAAADLMRANIARKEAAEEKPEQHEEKRLATWGTEVPEDLVLDE
KLLAEALKKEDARKKEERDERKRKYNVKWNDEVTAEDMEAYRMKRVHHDDPMKDFLH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgtcagtgtcctttaaatctcgagaagatcataggaagcaactcgaattg
gaggaagctcgtaaggcggggcttgcaccagctgaggtggatgaagatggaaaagaaatc
aatcctcatatacctcagtacatgtcatctgctccttggtaccttaatgctgagaggccg
agtttgaaacatcaaaggaaatggaagtcagatccaaactataccaaagcatggtatgat
agaggtgcgaagatctaccaagcggatcggtatagaaagggcgcctgtgagaactgcggg
gcaatgactcatgacaagaagtcatgcatggataggccaaggaagttgggagctaagtgg
acaagcatgcatatagcccctgatgagaaggtggagacgtttgagcttgattacgatgga
aaacgtgaccgttggaatgggtatgatgcatccacttacgcacacataatcgagagatat
gaagccagggatgaagctagaaggaaatatctgaaagaacagcagttaaagaagctggag
gagaagaacaaaaatgagagtggtggggaaggttcagcgagcgatgaggacgatgatgaa
gatgacctaaaagttgatgaggctaaggttgacgagagcaaacagatggattttgcaaag
gttgagaaacgtgttcgcaccacaggtggtggtagtactggaacagtcaggaatttgcga
attcgagaagatactgcaaaataccttttgaatctcgacgtcaattccgctcactatgac
cctaaaacgcgatcaatgcgcgaggatccactgccagatagtgatccaaatgagaagttt
tacgaaggggacaaccagtacagagtgagcggacaagcaatggagttcaagcagctgaac
atccatgcttgggaagcctttgagaaggggcaggatattcacatgcaagctgctccttcc
caagccgaattgctgtttaagaactacaaggtaatcaaggagaagttaaaatctaagacg
aaggacatgattatggagaagtatggaaatgctgcatccgatgaggctctgccaaaggag
ctcctcctagggcaaagcgagagagaggtcgaatatgaccgtgctggtagaataatcaaa
ggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtctatatcaataaccac
acaagtgtatggggctcgtggtggaaggatcaccagtggggttatctctgttgcaagcag
ttaatacgcaacagctactgcactggttcagctggaatagaggctgcagaagctgcggct
gatctgatgagggcaaatattgcaagaaaggaggctgcagaagagaaaccggagcagcat
gaagagaagaggctagctacttgggggacggaagtcccggaggatttggtgcttgatgag
aagctgttggctgaggctctgaagaaggaggacgcgaggaagaaggaagagagggacgag
aggaagcgcaagtacaacgtgaagtggaacgacgaggtgactgcagaggatatggaggcc
tatagaatgaagagggtccatcatgatgatccgatgaaggatttccttcactga
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