KEGG   Asparagus officinalis (garden asparagus): 109825382
Entry
109825382         CDS       T05243                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03020  RNA polymerase
aof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109825382
  09124 Replication and repair
   03420 Nucleotide excision repair
    109825382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aof03021]
    109825382
   03400 DNA repair and recombination proteins [BR:aof03400]
    109825382
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109825382
  RNA polymerase III system
   RNA polymerase III
     109825382
  RNA polymerase I system
   RNA polymerase I
     109825382
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109825382
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 109825382
NCBI-ProteinID: XP_020247827
LinkDB
Position
10:40008933..40014180
AA seq 143 aa
MADEDYNDMDMGYEDEPPEPEIEEGAEIDAENNNEDVPDDIVGGEAEDKDEASVERSRKT
TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggctgacgaagattacaacgacatggacatggggtatgaggatgagccaccagagcct
gaaatcgaggaaggggcagagatagatgcggagaataataatgaagatgttccagatgat
atcgttggaggagaagctgaagacaaggatgaagcatctgttgagcggtcacgtaaaact
acaaagtacatgacaaagtacgagcgtgcaagaattttgggtacacgtgctctccagatt
agcatgaatgcaccagtaatggtggagcttgaaggagagactgatccccttgagattgcg
atgaaggagctgcgtgagcgcaagattccattcaccatccgacgttatttgcctgatgga
agctatgaggactggggagttgatgagttgatagtggaagactcttggaagaggcaagtt
ggtggggattaa

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