Asparagus officinalis (garden asparagus): 109825403
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Entry
109825403 CDS
T05243
Name
(RefSeq) cell division cycle 20.5, cofactor of APC complex-like isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109825403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109825403
03036 Chromosome and associated proteins [BR:
aof03036
]
109825403
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
109825403
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
109825403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_Aladin
DSE1_N
Beta-prop_WDR3_2nd
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
eIF2A
Tricorn_2nd
Phage_tail_APC
Motif
Other DBs
NCBI-GeneID:
109825403
NCBI-ProteinID:
XP_020247847
LinkDB
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Position
10:56823884..56827532
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AA seq
417 aa
AA seq
DB search
MDLFDRRRRHPGRLRDRELPVLDFPITPASSTAPSRWGRYRQILDDLFLSINDDGGNAAN
KQRKRCRREKEPVESIISACQILDAAGLQDGDHLNLLDWSPSRNLAIVLDDVVHSLNPGT
SAHEIVFDYMGSSISSLSWAPDGRHLAVGMHDSLIYIWDVERKCPTRTLRNVHWRSSRVG
SLAWKCDNILTSGGSDGRVVNSDPRMPSAAHVVQSYRGHGPGDICGLKWSPDHASFKQLA
SGGSDGLVHVWDARNQNQWAFRFKVAARDASVRALDWCPFKGCLLATGGGVGGDGKSNGS
IRFWSTQTGACVRSVKTGSTRVCALMWSKNSEQFLSSCSGTDQDHMTLWDYPSCVRTGEL
VGHVAPYLALSPDGTTVASASGGIDSTLRLWNIFPPVPKPTVPFSGSYHAHIRIVSY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatctttttgatcgtcgacgccgccatccggggagactccgggacagggaactccct
gttcttgatttccccatcacgccggcgagctccaccgcgccttcgagatgggggcgctat
cggcagattcttgacgatctctttcttagcatcaacgacgatggcggcaatgccgccaac
aagcagaggaaaagatgtcgcagagagaaagaaccagtggaaagtatcatcagtgcctgt
cagattctcgatgcggctggtctccaggacggcgatcatctaaacctcctcgattggagc
cctagccgcaacctggcgatcgtcctcgacgacgtcgtgcactctctgaaccctggcacc
tccgctcatgagatcgtcttcgactacatgggcagttcaatttcgagcctcagctgggct
cccgacggccgccacctcgccgttggaatgcacgattcgctgatttacatatgggacgtc
gaacgaaagtgcccgacgaggactttgagaaatgtgcactggagatcatctcgagtcggg
tctctggcttggaaatgtgacaacatactgacctcaggaggctcagacggcagagttgtc
aacagcgatcccaggatgccgtctgcagcccacgttgttcaaagctaccgaggacacggg
cccggcgacatttgcgggctcaaatggtcacctgatcacgcaagcttcaagcaactagcg
agcggaggcagcgacggcctggttcatgtatgggatgctcgcaatcagaatcagtgggct
tttcgtttcaaggttgctgctagagatgcttctgtcagggcccttgactggtgccctttc
aagggttgcttgctggccacagggggaggtgttggaggggacggcaagagcaacggatcg
atcaggttctggagcacgcaaaccggtgcttgtgtgaggtcggtgaagaccggcagcacc
cgagtctgtgctctgatgtggagcaagaacagcgagcagtttttgagctcgtgcagcggt
accgatcaggatcacatgactctctgggactacccatcctgtgttaggacaggagagctt
gtgggtcacgtcgccccatacttagctttgagcccagatggcaccacggttgcatcggct
tcagggggcatcgactcaacgctgagattgtggaacattttccccccagttcccaagccc
acagtgcccttcagcggttcgtatcatgctcacatcaggattgtatcttactga
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