KEGG   Asparagus officinalis (garden asparagus): 109825589
Entry
109825589         CDS       T05243                                 
Name
(RefSeq) WD repeat-containing protein 82-B isoform X1
  KO
K14962  COMPASS component SWD2
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109825589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109825589
   03036 Chromosome and associated proteins [BR:aof03036]
    109825589
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     109825589
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     109825589
    COMPASS/SET1 complex (yeast)
     109825589
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_SCAP eIF2A Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st PQQ_2 Beta-prop_WDR35_TULP_N KNTC1_N VPS11_N Beta-prop_DCAF4 Cytochrom_D1 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 109825589
NCBI-ProteinID: XP_020248037
LinkDB
Position
10:4429602..4434938
AA seq 331 aa
MPGGQMEREEKVAMELTDEVLKSMEVGMAFRDYNGRISSMDFHKATNYLVTASDDESIRL
YDVQNAMCLKTINSKKYGVDLVCFTAHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFKGH
HDRVVSLSLCPRKEYFISGSLDRTVLLWDQRADRSQGLLRVQGRPAVSYDDQGMVFAIAF
GGLIRMFDARKYEKGPFDIYSVGADKSDANVVKFSNDGRLMLLTTMDGHIHVLDSFRGNL
LSTYNVKPVSSHATLEASFSPDGMYIVSGSGDGSVYAWNVRGGKVAFWASTDTEPPLIKW
APGSVMFTTGSSELSFWVPDLSKLGSFVVMK
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccaggggggcagatggaaagagaggagaaagtagccatggagctcactgatgaggta
ttgaagagcatggaggtgggcatggctttcagagactataatggcagaataagttcaatg
gattttcacaaggctacaaattatctagtaacagccagtgacgatgaatcaattcgcctc
tatgatgtgcaaaatgctatgtgtttgaagacgattaatagcaaaaaatatggggttgat
ctggtttgtttcactgctcatccaacaactgttatatactcttcaaaaaatggctgggat
gaatctctccggctgctttctttgaacgataacaagtatttgcggtattttaaaggtcac
catgatagggttgtttctctttccttgtgccctcgaaaggagtacttcatctctggttct
cttgatcggacagtcttgttatgggatcaaagagctgataggtctcagggccttttacgt
gtacaaggaaggccagcagtttcttatgatgatcaaggaatggtctttgcaattgctttt
ggagggcttatacgaatgtttgatgctcgcaagtatgagaagggtccatttgatatatat
tctgttggagcagacaaatctgatgccaatgtggtgaagttcagcaatgatggaagactt
atgcttttgactactatggatggccatattcatgtgcttgattcctttcggggcaatctg
ttgtccacttacaatgtgaagccagtttcaagccatgctactcttgaggcatcattcagt
cctgatggaatgtacattgtatcaggttctggggatggtagtgtctatgcttggaatgtc
agaggcggaaaggttgcattttgggcaagtactgacacagaaccaccattgataaagtgg
gcaccgggaagtgtcatgttcaccactggatcatccgagctttcgttttgggttccagac
ttatccaagctgggttcctttgttgttatgaagtag

DBGET integrated database retrieval system