Asparagus officinalis (garden asparagus): 109825863
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Entry
109825863 CDS
T05243
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109825863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109825863
03009 Ribosome biogenesis [BR:
aof03009
]
109825863
04131 Membrane trafficking [BR:
aof04131
]
109825863
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109825863
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109825863
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109825863
Membrane trafficking [BR:
aof04131
]
SNARE
SNARE associated proteins
Others
109825863
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109825863
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109825863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Vps4_C
ABC_tran
AAA_7
Viral_helicase1
AAA_lid_PRS2_C
AAA_24
NB-ARC
TsaE
DUF815
NACHT
Zeta_toxin
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
109825863
NCBI-ProteinID:
XP_020248362
LinkDB
All DBs
Position
10:complement(64508961..64516238)
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AA seq
812 aa
AA seq
DB search
MASGGGQGEGSSSDPKGSKKDFSTAILERKKAANRLVVDEAVNDDNSVVSMHPDTMEKLQ
LFRGDTILLKGKKRKDTICIALADETCEEPKIRMNKVVRSNLRVRLGDVVSVHQCQDVKY
GQRVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDP
PEYCIVSPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFK
SIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFE
EAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPN
SIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEDVNLERISKETHGYVGADL
AALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEV
PNVSWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI
ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVG
DAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEA
SRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERER
KRGENPEAMEEDEVDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSE
FRFSERSEPAAGAGSDPFATSAAAADDDDLYN
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggcggcggtcaaggcgaaggatcttcttcagatcctaagggatcgaagaag
gactttagtactgcgattctcgagcggaagaaggcggcgaatcgattggtggtcgatgag
gccgtgaatgatgacaactccgtggtttcgatgcatcctgatacgatggagaagctccag
ctgtttcgtggtgatacgatccttttaaagggtaagaagaggaaggacaccatatgtatt
gcacttgctgacgaaacgtgtgaagaaccaaaaatcaggatgaacaaggttgtcagatca
aacctaagggtgaggctaggtgatgtggtgtctgtccatcagtgtcaggatgttaagtat
gggcagcgagtacatatactccctattgatgataccattgaaggtgtcactgggaacctc
tttgatgcgtacttgaagccatatttcctcgaggcatatcgtcctctcaggaagggggat
cttttccttgtcagaggaggcatgcgaagtgttgaatttaaggttatagaaactgatcca
cctgagtactgcattgtgtctcctgacacggagatcttttgtgagggtgaacctgtgaaa
agggaggatgaagacagactagatgaagtcggctatgatgatgttggtggagtgcgcaag
caaatggctcagatcagagagcttgttgagcttcctctgcgacatcctcaactgttcaaa
tctattggtgtgaagccacctaagggtatccttctctatggacctcctggttcgggtaag
acactgattgccagggcagttgcaaacgagactggtgcatttttcttctgtatcaatggt
ccagagatcatgtcaaagctggctggagagagtgagagcaatctgagaaaggcttttgag
gaagcagagaagaatgctccatcaatcatcttcattgatgagattgactcaattgctccc
aagagagaaaagactaatggggaagtggagaggaggattgtttctcagctactaacttta
atggatggcttgaaatcccgtgctcatgtaatcgttattggcgctacaaacaggcctaac
agcatagaccctgctcttagaaggtttgggagatttgacagggaaatcgacattggagtc
cctgatgaagttggcaggcttgaggtgcttcgcattcataccaagaacatgaagctatct
gaagatgtcaatctggaaagaatttccaaagaaactcatggttacgttggtgctgatctt
gcagccctttgcactgaagctgcccttcaatgtatcagggaaaaaatggatgtcatcgac
ttagaagacgattctatagatgcagaaatactcaactcaatggctgttacagatgaacac
tttaagactgctcttggaactagcaatccctcagctctccgtgaaacagtggtcgaagtg
cccaatgtcagctgggaagatattggtgggcttgacaacgttaagagggaactccaagag
actgttcaatatccagtcgagcatcctgagaagtttgagaagttcggaatgtctccttca
aaaggagttttgttttatggtcctcctggttgtggtaaaaccttgttagctaaagcaatt
gccaatgagtgccaggcaaatttcatcagtatcaagggtcctgaattgctcacaatgtgg
tttggggagagtgaagcaaatgttcgtgagatctttgataaggctcgcgggtctgccccg
tgtgtccttttctttgatgagctcgactcaattgctactcagagaggaagcagcgtcggt
gatgcaggaggtgctgctgatagggttctcaaccagcttctcacagagatggatggaatg
tctgcaaagaaaactgttttcatcattggggccactaacaggccagacattatagatcca
gcattgcttaggccaggacgtcttgatcagttaatttatattcctttgcctgatgaggcc
tctcgcctccaaatatttaaagcttgcttgaggaagtcgcctgtctcaaaggacgttgac
ttgagggctcttgcaaagtatactcaaggattcagtggtgcggatattaccgaaatctgt
cagcgtgcttgtaaatatgccatcagggagaatattgagaaggacatcgaaagggaaagg
aagagaggtgagaaccctgaagcaatggaggaagacgaggtcgatgaggtcgcagagatc
aaagccgctcactttgaagaatccatgaaattcgctcgaagaagtgtcagtgacgctgac
attcgcaagtaccaggcattcgcccagacccttcagcagtctaggggtttcgggagcgag
ttccgcttctcagagcggtccgagcctgccgctggcgctggatctgacccctttgcaacc
tctgctgcggctgcagacgatgatgatttatacaactaa
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