Asparagus officinalis (garden asparagus): 109825984
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Entry
109825984 CDS
T05243
Name
(RefSeq) DNA damage-binding protein 1a
KO
K10610
DNA damage-binding protein 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03420
Nucleotide excision repair
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109825984
09124 Replication and repair
03420 Nucleotide excision repair
109825984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109825984
03400 DNA repair and recombination proteins [BR:
aof03400
]
109825984
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
109825984
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109825984
TCR (transcription coupled repair) factors
Cul4-CSA complex
109825984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta_propel
Motif
Other DBs
NCBI-GeneID:
109825984
NCBI-ProteinID:
XP_020248507
LinkDB
All DBs
Position
10:65606746..65627020
Genome browser
AA seq
1089 aa
AA seq
DB search
MSMWNYVVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEIHYLTPHGLQPMLDVPIYG
RIATLELFRPHGEQQDFLFIATERYKFCVLQWDAEASELITRAMGDVSDRIGRPTDNGQV
GVSISDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIAVL
YQDNKDARHVKTYEVGLKEKDFVEGPWSQNNLDNGAGLLIPVPMPLGGVIIIGEETIVYC
SANSFKAIPIKPSITRAYGRVDADGSRYLLSDNTGLLHLLVITHEKERVTGLKIEHLGET
SVASTISYLDNAVVYVGSSYGDSQLVKLNLQPDANGSYVEALERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGLWSLRSSTDDPHDTFLVVS
FISETRFLAMNMEDELEETEIEGFYSQAQTLFCQNAINDQLVQVTASSVRLVSSTSRELL
DEWTAPSGFSVNVATANASQVLLATGGGHLVYLEIGNAKLTEVKHIQLEYEISCLDINPI
GENSCYSSLAAVGMWTDISARIYSLPGLDMITKENLGGEIIPRSVLLCKFEGVSYLLCAL
GDGHLFNFLLNMNTGELSDRKKVSLGTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKL
LYSNVNLREVSHMCPFNSAAYPDSLAIAKEGELSIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAICSYKNCHTSTEESETHFVRLLDDQTFEFKSIYQLDTYENGCSIISCSFSDD
NNVYYCVGTAYVLPEENEPTKGRILVFAVEDGKLQLITEKETKGAVYSLNAFNGKLLVAI
NQKIQLYKWMLREDGSRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMTAIEILNDDIYLGAENNFNLFTVRRNSDGATDEERGRLEVVGEYHL
GEFVNCFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLSHDHYIFLEKLQGCLNKV
IKGVGGLIHEQWRSFNNEKKTSDARNFLDGDLIESFLDLSRVKMEEISKTMDVPVEELCR
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgtggaactacgtggtgacggcccacaagcccaccaacgtcacccactcctgc
gtcggcaacttcacctcccctcacgagctcaacctcatcatcgcgaaatgtactcgaatc
gagattcattacctcactccccacggcctacagcctatgctggatgttccaatatatgga
agaattgcgactcttgaactctttagacctcatggtgaacaacaagatttcctatttatt
gccacagaaagatacaaattttgtgtacttcaatgggatgcagaagcgtcagagctcatt
acaagagcaatgggagatgtatctgatcgaataggtcgtccaacagataatggacaggtt
ggtgtttcaatttcggattgtaggttgattggtcttcacctgtatgatggtctcttcaag
gttataccgtttgataacaaagggcaactaaaggaagcattcaatatcaggcttgaagaa
cttcaggttttggatatcaaatttctttatggttgtcccaaacccacaattgcagtgctt
tatcaggataataaagatgctcgacatgtcaaaacatatgaggttggtctcaaggagaaa
gactttgttgagggcccatggtcacagaataatcttgataatggagctgggctgctgatt
cctgtccctatgcctcttggtggtgttattattattggggaggagactattgtctattgc
agtgcaaattcattcaaagctataccgatcaaaccatccattacaagagcctatgggagg
gttgatgcagatggttctcggtacttgctcagtgataatacaggacttctgcatttgctt
gttatcactcatgaaaaagaaagggtaactggactcaaaattgagcatttaggggagaca
tctgtggcatccacaatatcttatcttgataatgcagtggtatatgttggttcaagctat
ggagattcacagctcgtaaaactgaatttgcaacctgatgcaaatggttcatatgttgaa
gcccttgaaagatatgttaacctagggcctattgttgatttttgtgttgttgaccttgaa
aggcaaggtcaaggtcaggtggtcacttgctcgggggcatataaagacggttcacttcgt
gttgttcgaaatggcatcgggatcaacgaacaggcatctgtagaacttcaaggcatcaaa
ggcttgtggtcattacgttcttccactgatgatccacatgatactttcctggtagtgagc
tttatcagtgagacacgctttctggcaatgaatatggaagatgagttagaagaaactgaa
attgaaggcttttattctcaagcccagactttattttgccaaaatgctatcaatgatcag
cttgtccaggtaactgcaagctctgttcgattagtcagttcgacatctcgggagctgtta
gatgagtggactgctccttctggattttctgtcaacgttgcaactgcaaatgctagccag
gttctcttggctacaggaggtggacatcttgtttaccttgaaattgggaatgctaaattg
actgaagtaaagcatatacagctagaatatgagatatcatgtctcgacataaatccaatt
ggggaaaattcttgctatagttcattagcagcagttgggatgtggactgatataagcgcc
aggatatattcactaccgggcttggatatgatcacaaaggaaaatctgggtggagaaatt
atacctcgttccgtccttctatgcaaatttgaaggagtatcatacttgttatgtgccctt
ggagatggacacctgttcaactttctcttgaatatgaacactggtgaactgtcagatagg
aagaaagtatctcttgggacgcaaccaattacactacgtacattttcttcaaaggatacc
acccatgtttttgctgcatcagataggccaaccgtgatatacagtagcaataagaagtta
ctttacagtaatgtgaatctgagagaagttagccatatgtgcccttttaactctgctgct
tacccagacagccttgcaatagccaaagagggtgaactttcaattggaactattgatgac
attcagaagcttcatattcgctcaatccctctgggagaacatgcacggcgtatctgccat
caggagcagtctcggactttcgcgatctgtagttataaaaactgtcataccagcacagag
gaaagtgaaacacattttgttcggttgttagatgatcaaacttttgagttcaaatcaatc
tatcagttggacacttatgaaaatggttgctctatcattagttgttccttctcagatgac
aacaatgtctattattgtgttggaactgcctatgttctgcctgaagaaaatgaacccacc
aaagggcgtattcttgtttttgcagttgaagatgggaagctacaattaattactgaaaag
gaaaccaaaggagctgtttactctctcaatgccttcaatgggaaattactggttgctatc
aatcaaaagattcaattatacaagtggatgcttcgagaggatggatcacgagagctgcag
tcagagtgtgggcatcatggtcatatactcgctttgtatgttcaaacacgtggagacttt
attgtagttggcgatttgatgaaatcaatctctcttttgatatataagcatgaagaaggt
gccattgaagagcgcgcccgtgattataacgcaaactggatgaccgccattgagattctc
aacgatgacatttacctcggtgcagagaacaacttcaatctcttcacagttcgaagaaac
agcgacggagctactgacgaggagcgtggtaggctcgaggtggtcggtgaataccacctt
ggtgagtttgttaactgtttcaggcatggctcccttgttatgaggctcccagactctgag
atcggccaaatccccaccgttatatttggcaccgttaatggggttattggggttattgct
tctctttctcatgaccattacatttttctggaaaagctccagggatgccttaataaggtt
attaagggagttggaggcttaattcatgagcaatggagatcatttaataatgagaagaaa
acttctgatgctagaaatttcttggatggggatcttattgaatctttccttgatcttagc
cgcgtgaagatggaggagatctctaagaccatggatgttcctgttgaggagctctgcagg
agagttgaggagcttacacgattacactga
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integrated database retrieval system
