Asparagus officinalis (garden asparagus): 109826218
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Entry
109826218 CDS
T05243
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aof03036
]
109826218
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aof04812
]
109826218
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109826218
Cytoskeleton proteins [BR:
aof04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
109826218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_2
HEAT_EZ
TOR1L1_N
Vac14_Fab1_bd
Tti2
HEAT_DAAF5
Adaptin_N
HEAT_Maestro
INTS1_R4
UTP20
MMS19_C
Rrn6_HB
Motif
Other DBs
NCBI-GeneID:
109826218
NCBI-ProteinID:
XP_020248807
LinkDB
All DBs
Position
10:complement(71823320..71849214)
Genome browser
AA seq
1376 aa
AA seq
DB search
MRAGFALVRGEHCEIGVTTCAAHLQPGRWVSSPTIIVERAGSYAWAHKSWRVREEFARTV
ATAVGLFASTELTLQRVLLPPVLQLVNDPNYSVREAAASCIEEMYRQVGPQFREELQRQY
IPSSMMKEINARLEKIEPKVNPSDGTGTLTRFVPIETKSFNSVHKSKRGSPRSKSTPRET
PFYGAAGEADVTEKPVDPIMVYSEKELIREIEKIASTLVPEKDWSLRIAAMQRIEGLVFG
GATNYPSLPMILKQLVPPLSTQLLDRRSSIVKQACHLLNLLSKELLGDFEACAELFIPVL
FKLVVITVLVIAESADNCIKTMLRNCKVSRVLPRIADSAKNDRNAVLRARCCEYALLILE
YWADAPEIQRSADVYEDLIKCCVADAMSEVRSTARTCYRMFTKTWPERSRRLFLSFDPVI
QRIINDEDGGLHKRYASPSLRERGGQLSRAPSHSPTSYIPGYGTSAIVAMDKTSAIASGV
SLSSGSRLSSQSKTSGNSVERDLETMLHASKQKVSAIESLLRGVNLSDKSKSSITQSTSL
DLGIGFDTPSARDPLFPSAVSGSSNLYSQNSLDSAVSDITRGAVRNGGSDLTDLICLQNH
ALNDSTKSSYQRNLSSDSPSALSLATVRKSSGRSLDVSIEENNDIRSTRRFTNMQTEKQF
VDTHYKDSVFRDSHSHYVPNFQRPLIRRQVTGRVSASGRNSFDDSQSSFAEMFKFVDGPA
SLNDALTEGLTANSDWAARVSAFNYLRNLLQQGSRGVQEVTQNFDKVMKLFFRHLDDPHH
KVAQAALQTLAEVIPACRKPFESYIERILPSVFSRLIDPKELVRKPCATTLEIVGRTYSI
DSLLPALLRSLDEQRSPKAKLAVIDFANNSFNKHAANSDSQHNSGFLKLWLAKLAPLVYD
KNTKLKEASISGIISVYSYFDSTAVLNFILSLSVQEQNSLRRALKQYTPRIEVDLMNFLQ
NKKERQRSKSFYDQSDVTGTSSEEGYIGTSRKSQLFGRYSAGSVDSEGERKWSSMQEPAL
DVSIGQATSDDIRRPYQNIELNFDTDADAVGQKSREMTCNANNSVESTMTWMNVIEKSDQ
SIEHDSPSGTPRLDINKLLNYNGSRATGLSPSNESIQDKELACEQLNPAKNNSQVDNGPC
IPQILHRFLQICIGSDDTSALSKREALQQLIEASIIKNTSVWTKYFNQILTAVLEVLDDP
DLSTKELALSLVVEMLKNQKEAMEDSVEIVTEKLLHTSKDGNAKVSNEAHQCLTILLAQY
DPFRCLTVIVPLLASDDEKTLVICINCLTKLVGRFSQEELITQLPSFLPALFDAFGSQSP
DVRKTVVFCLVDIYIMLGQTFLPYLEGLSSTQLRLVTIYANRISQARTGTAIDANH
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctggctttgcattagtgcggggtgaacactgcgaaatcggtgtcaccacgtgc
gccgctcacttgcagccgggaaggtgggtttcttcaccaactatcattgtggagagagct
ggaagttatgcctgggctcacaaaagttggagagtacgcgaagagtttgcaaggacagtt
gcaacagcagttggcctttttgcttctactgagctcacccttcaaagggtccttcttcct
cccgttttgcaactagtaaatgacccaaactatagtgttagagaagctgctgcatcttgc
atagaggagatgtacagacaggttggtcctcagtttcgtgaagaattgcagcggcaatat
attccttcatcaatgatgaaagagattaatgcaaggctagaaaagatagaaccgaaagta
aacccatccgacggaacagggactctgactcgctttgtacccatagaaacaaaatcattt
aattctgtccataaaagtaaaaggggaagtccaaggtctaagagcaccccaagggaaaca
ccattttatggagccgcaggggaggctgatgtaactgaaaagcctgtggaccctatcatg
gtctactcggagaaggagctaattcgggaaattgagaagatagcatctactctagtacca
gaaaaagattggtcactccgtatagctgctatgcagagaattgagggcctggtttttgga
ggtgctaccaattatccatcacttcccatgatcttaaagcagcttgtacctcctttaagc
actcaactgttggatcgacgttctagcatagttaaacaggcctgtcatcttctaaactta
ttatctaaggaacttttgggggactttgaggcctgtgcagagttgttcataccggtgtta
tttaaacttgttgttataactgtacttgtcattgctgagtccgctgacaactgcataaag
acgatgttgcgcaactgcaaggtttcacgtgttcttcctcgcatagctgattctgcaaag
aatgaccgaaatgcagttcttcgtgctaggtgttgtgagtatgcactgctaatactcgag
tactgggccgatgctccagaaatacagagatcagctgatgtttatgaagatctcataaag
tgctgtgttgcagatgctatgagtgaggttcgctcaactgctcggacatgctaccggatg
ttcactaaaacttggccagagcgatctcgtcgcctttttttgtcctttgatcctgtcata
caaaggataattaatgacgaagatggaggcctgcacaaaagatatgcttccccctcactt
cgcgaaagaggagggcagctttcacgggctccatctcattcccctacatcatatattcct
ggttatggtacttccgcaatcgttgcaatggacaagacttctgctattgcatctggagta
tctttgtcctcaggctctcgtctttcatcacagtcgaagacatctgggaattctgtggag
agagatcttgaaaccatgctgcatgccagcaaacaaaaggtgtctgcaattgaaagtttg
ctaagaggtgttaacctatctgataaatcgaagtcctcaattactcagtcaaccagcttg
gatctaggtataggatttgacaccccatctgcccgcgatccgctatttcctagtgcagtt
tctggttcaagtaatctctattcacagaattcactcgattcagctgtcagtgatattaca
agaggtgcagtaaggaatggaggctcagatttaactgatctcatttgtcttcagaaccat
gctttaaacgactcaaccaagtcatcctaccaaaggaatctgtcatctgattctccatct
gctttgtcattggccacagttagaaaatcttctggaagatcactagatgtaagtattgaa
gaaaataatgatatcagatcgacgaggcgttttacgaatatgcagacagaaaaacaattc
gtggacacacactataaggattccgtctttagagattcacatagtcattatgttcctaat
tttcagagaccacttattagaaggcaggttacaggaagagtttcagcaagtggtagaaac
agtttcgatgatagccagtcatcgtttgctgaaatgtttaaatttgttgatggcccagca
tccttgaatgatgcactcactgagggtttgactgccaactcggattgggctgctagagtt
tctgcttttaactatctccgaaatttgctgcaacaaggatcaagaggcgttcaagaagtt
actcagaattttgacaaggttatgaagttattttttcgacacttagacgatcctcaccat
aaagttgcacaggcagctcttcaaacacttgcagaggttattccagcctgtagaaagcct
tttgaaagttatattgaaaggattttaccgtctgtgttttctcgattgattgacccaaag
gaattggtcaggaagccttgcgcaacaacgttggaaattgttggcagaacttacagtatt
gattctctgttgcctgctcttttacggtcccttgatgaacagaggtctccgaaggcaaag
ttggctgttattgattttgcaaataactccttcaacaagcatgcagcaaattctgatagt
caacataatagcgggtttcttaagctatggctcgctaaattggcacctttagtatatgat
aaaaatacaaaactaaaagaagcatctatttctggaattatttctgtttactcgtatttt
gattcaacagcagtcttgaactttattcttagtttgtcagttcaagaacagaactcattg
cggcgagcacttaaacagtatactcctcgtatagaagttgatctgatgaacttcttgcag
aataagaaagaacgtcaacgttccaaatcattttatgatcagtccgatgtcaccggaaca
tcttctgaggaaggctacattggcacgtcgagaaaaagtcaactttttggcagatactca
gcaggttcagttgatagtgaaggtgaaaggaagtggagttccatgcaggaaccagctctc
gatgtctcaattggccaggcaacatctgatgacattcgccggccataccaaaacattgaa
cttaactttgatacagatgcagatgctgttggtcaaaagagcagggaaatgacgtgcaat
gctaacaactcagtagagagtacgatgacatggatgaatgtcatagaaaaatctgaccaa
agtatagaacatgacagtccttcaggaactcctcgactagatattaataaacttttgaat
tataacgggtcaagggccactggattgagtcctagtaatgaaagtatccaagataaggag
cttgcatgtgagcagcttaatcctgctaagaacaattctcaagttgataatgggccatgt
attccacagattcttcatcggtttctgcagatttgcattggtagtgatgatacatcagct
ttaagtaaacgggaggcgttgcagcagttgattgaagcgtcaattatcaaaaatacctct
gtatggaccaagtacttcaaccaaattttgacggcagtacttgaagtattggatgaccct
gatttatccaccaaggaacttgctctttctttggttgttgaaatgctcaagaatcagaag
gaggcaatggaagattcggttgagattgttactgaaaagttattacacacatctaaagat
gggaatgcgaaggtctcaaatgaagcgcaccaatgtctgaccattctcttagctcaatat
gatccatttcgatgtcttactgttattgttcctttattagccagtgatgatgagaagacc
cttgttatttgcatcaactgtttgaccaagcttgttggtcggttttcacaagaggagttg
ataacacaattgccttcatttctgcctgcactttttgatgctttcgggagccagagtcca
gatgttcgtaagactgtggtcttctgtttggtggatatttacattatgcttggccagaca
ttccttccatatttagaagggcttagcagtactcagctgaggttggtaactatttacgct
aacagaatttctcaggcaaggactggcacagcaatcgatgctaaccattga
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integrated database retrieval system
