Asparagus officinalis (garden asparagus): 109826372
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Entry
109826372 CDS
T05243
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109826372
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aof01002
]
109826372
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109826372
03036 Chromosome and associated proteins [BR:
aof03036
]
109826372
Peptidases and inhibitors [BR:
aof01002
]
Metallo peptidases
Family M1
109826372
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109826372
Coactivators
SAGA/TFTC/STAGA complex
109826372
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109826372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
109826372
NCBI-ProteinID:
XP_020248990
LinkDB
All DBs
Position
10:complement(36842152..36895704)
Genome browser
AA seq
1315 aa
AA seq
DB search
MAKPRKSKNEEQKNESSGCVALHQKLCLSIDMDRKRIFGYTELKILASEVGYVALHADDM
VISSVTVDGEPVEFEHIPHYQHVEDERRWSSVSCCQTAADAACSTYLSLLNREMVPNLLI
SCNKSKKTVSNQSQGEKENIVQNSSAEEVVNGYSAPSEDKDVKHVRINYWVERAEAGIHF
GKSVMHTNNQIRRARCWFPCIDSISQCCTFDMEFTVNSGYVAVSNGDLLYQVLSKDDPPR
KTYVYKLNIPVSAGWISLAVGSFEILPDSHTGTISYMCLPPNLRELQNTVSFFHQAFSHY
EDYLSMSFPFGSYKQIFIPPEISLSSTSLGASMCIFTSQLLFDEKVIDKTIETRVKLAYA
LARQWFGVYITVEERTDEWLLDGLAGFLTDSFIKKFFGNNEARFRRYKSNCTVCKVDING
ATALSSFASSDLYGTQTIGLHGKIRSWKAVAVLQMLEKQMGPDSFRKILQSIVYRGLDAA
RSRTLSTKEFSNLAYKVGNLERPFLKEFFPSWVESCGCPILRMGLSYIKRKNMIEFAVMR
GCTAKPGDAANGNIDTAVREGDTGWPGMMSIRVHELDGTYDHPSLPLAGDAWQLLEIQCH
SKLTLKRIQKPKKGSKPDGSDDNADLPNLDARSSMDSPLLWIRVDPDMEYLAEIHFHQPI
QMWINQLEKDKDVVAQAQAIAMLEKLPQLSFAVVNALNNFLSDSKAFWRVRIEAAYALAH
TASEDTDWAGLLHLIKFYKSRRFDADIGLPKPNDFYDVPEYFVLEAIPHAIALVKAADKK
SPREAVEFILQLLKYNDNNGNPYSDVFWLCALVQSVGELEFGQQNISFLSSLLKRIDQLL
QFDSFMPRYNGILTVSCLRTLAQIGWKMSSIVPLERISEVIKPFCSSEKASWIVRLEACK
LLLDLEFHCRGLDATLSLFMKFLEEETSLRGETKLAVHVMHLCQINAEAEIGYDVTCPTL
VALLCMLASKKAFNNVFLRHYLFGIIQIVAGRPPTLYGVPKTLEQFPTIQELSVSNNSER
KRNVLKISKPQETSAPATSNLSDAHIVPIVDASKDADTVSNNSERKRNVLKIKVKQPGSS
SKADGIDQIIENSRGGQNDTNEVVGPTSSVSVDAPNHHDTSEPLHVSNQNIEEVNSCYVY
ESRVTASIGSSAKLNKDGVQELQCTADSRKSIPWDQSSPVTERTEVEVHQEHSLLQEATV
KRKTEKKKDKEKKRKREDKSGEKDRSNDPAYLERKRQKKEKKRLKKMEKMMKKGEGKSLD
DSMKPVAESSKGDQSSEGSKKLQGKVEDHNILKPKETSSAPKLKIKIRSLGGKNG
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctcggaaatcgaagaacgaggagcagaagaacgagagctcgggatgcgtc
gccctccaccaaaagctttgcctctccatcgacatggacagaaaaaggatcttcgggtat
actgaactgaaaatcctggcttcagaggttggatatgttgctctgcacgctgatgatatg
gtcattagcagtgtaactgtggacggggaaccagttgagtttgaacacataccacattat
caacatgttgaggatgagagaagatggtcgtctgtctcatgctgtcaaacagctgctgat
gctgcttgttcgacatacctctcattgctgaacagagaaatggtccccaatttgctaatt
tcatgtaacaaatcaaagaagacagtaagcaaccagagccaaggggagaaggaaaatatt
gtacagaattcatctgcagaggaggttgttaatggatatagtgctccttcagaggataag
gatgtgaaacatgttcgcataaactattgggtagagagggcagaggcaggtatccatttt
ggaaaaagtgttatgcatactaataaccagatacggcgtgctcgctgctggttcccatgc
atagatagtatttcgcaatgttgcacctttgatatggaatttacagtcaactctggttat
gtggctgttagcaacggtgacttactttatcaggttttgagcaaagatgatcctccacgc
aaaacatatgtatataaattaaatattcctgtcagtgcaggctggatttctttggctgtt
ggttcatttgagattctgccggacagtcatactggcactatatcatacatgtgtttgcct
cccaatttgcgagagcttcagaacacagttagcttctttcatcaagcctttagtcattac
gaagattacctttccatgtcctttccctttggttcatacaaacaaatcttcataccacct
gaaatatccttatcctctacgagcctgggagcctccatgtgtatatttacatctcaactc
ttatttgatgagaaagtcatagataagacaattgaaacacgagtcaagcttgcttatgcc
cttgcaaggcaatggtttggagtgtacataactgtggaggagagaacagatgagtggttg
ctagatgggctagctggatttcttactgactcttttattaagaaattttttggaaataat
gaagctcgttttcgacggtacaagtctaattgcactgtctgtaaagtcgacattaatgga
gcaactgctttgagctcttttgcttctagtgatctttatggaactcagactattggtttg
catggaaagattcgatcatggaaagctgtagctgttcttcaaatgttggagaagcagatg
ggcccagattctttccgtaagattctgcagagtatagtgtacaggggtttagatgcggct
cggtccagaactcttagtacaaaagaattcagtaaccttgcatataaggttgggaatctg
gaacgcccattccttaaagaattctttccttcttgggttgaatcttgtggatgcccgatt
ttgaggatggggctttcatacatcaagaggaaaaatatgattgaatttgctgtgatgaga
ggctgcactgcaaaacctggtgatgctgccaacggaaacattgatactgcagttcgagaa
ggtgatactggttggcctggaatgatgagcatccgagttcatgagcttgatggaacgtat
gaccatccaagtctgcccttggctggggatgcctggcaactacttgagatacagtgccat
tccaagttaactttgaaacgcatccagaagcctaaaaagggctccaaacctgatggttct
gatgataatgcagatcttccaaatttagatgcacgctcaagtatggactccccattgttg
tggatcagagtggatccggatatggaataccttgctgaaattcattttcaccagcccatt
cagatgtggattaatcaacttgagaaagacaaggatgtagttgctcaggctcaagcaatc
gcaatgctagagaagctacctcagctttcatttgctgtagtcaatgctcttaacaacttt
cttagcgattcaaaggcattctggagagtcagaattgaagcagcatacgcattagcacat
acagcttcggaggacactgattgggcgggtttgcttcatttgattaaattttataaaagt
cgaaggtttgatgcagatattggattgcctaagcctaatgacttttatgatgttccagag
tatttcgtgcttgaggcaatcccacatgcaatagctttggtcaaagcagcagataaaaag
agccccagagaagctgtagagttcatattacaattgctaaagtacaatgataacaatggg
aacccctactcagatgttttttggctttgcgcactggttcagtctgtgggcgagcttgaa
tttggtcaacagaatatctccttcttatcatctcttctcaaacgcattgatcaacttctg
caatttgacagctttatgcctagatacaatgggatcctgactgttagctgtcttcgcacc
ctagcacagataggatggaagatgtcatctattgtacctcttgaacgtatttcagaagtc
atcaaaccattctgtagctctgagaaagcatcttggatagtgcggcttgaagcatgcaag
ttgcttctggatcttgaattccattgtagaggccttgatgccactttatctctgtttatg
aaattcctggaggaagagacatctttacgaggagaaaccaaattggctgtgcatgtgatg
cacttgtgtcaaataaatgcagaagcggaaattggctatgatgtgacatgcccaactctt
gttgctctcctttgcatgcttgcaagcaaaaaagcatttaacaatgtctttctgaggcac
tatttgttcggcatcatacaaattgttgctgggaggccaccgacactttatggtgttcca
aagaccctagagcagtttccgacgatccaagaactgtctgtctccaataatagtgagagg
aagagaaatgtcttaaagatctcgaaacctcaagaaacttctgccccggcaacttcaaac
ctctctgatgctcatatagtgcccattgttgatgcttccaaggacgctgatactgtctcc
aataatagtgagaggaagagaaatgttttaaagatcaaggtcaagcaaccaggatcatca
agtaaagcagatggtattgaccaaatcatcgaaaattctcgaggcgggcagaatgacacc
aatgaagtagtaggccccaccagttctgtttctgtagatgcccctaatcatcatgataca
agcgagccacttcatgtcagtaaccaaaacattgaagaagtgaactcctgttatgtttac
gaatctcgagtaactgctagtattggtagcagcgccaaattgaataaagatggtgttcag
gagttacagtgcacagctgattcaaggaagagtattccttgggatcaatcttctcctgtc
actgagagaactgaggtggaagttcatcaagaacactccctcctacaggaggcgacagtg
aagaggaagacggaaaagaaaaaggacaaggaaaagaaaaggaaacgagaagataaatct
ggtgagaaagatcgttctaatgaccctgcttatctggagcgtaagcgccagaagaaggag
aagaaacgtctcaagaagatggaaaagatgatgaagaagggtgaggggaagtctttggat
gattcgatgaaacctgtggcagagtcttctaaaggtgatcaatcctctgaaggatccaag
aaattgcaagggaaagtagaagaccataatatactgaaacctaaagaaaccagttcagcc
cctaaattaaaaattaaaattagaagtcttggtggcaaaaatgggtag
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integrated database retrieval system
