Asparagus officinalis (garden asparagus): 109826438
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Entry
109826438 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109826438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109826438
Membrane trafficking [BR:
aof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109826438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
109826438
NCBI-ProteinID:
XP_020249059
LinkDB
All DBs
Position
10:10228774..10246473
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AA seq
845 aa
AA seq
DB search
METTFAENNWYVTFDSRQVKSDDQIFGISQRVESDATPQKPPFFLLSLRLCFSPSIPNPW
RRLPPRRAPSRHRRIPDGPDGVRNDVEPRSKVEASKCVVPIAASIAPIRSSPDLVTLPYA
PLRCKPPCSAVLNPYCSVDFNAKIWICPLCFSRNQFPHHYAGISESNVPGELYNQCSTVE
YALDSSAVGPALPPVFLFVLDTCLIEEELEFAKGDAAGELAMRWAIGLLPENALVGLITY
GTQVHLHELGFADISKLYVFRGTKEISKDEILEQLGLSLAGRGLVKGGVQPNGMPMVQQQ
NVMGSSSVNRFLLPASDCEYTLSALLDEMQTDQWPVEAGHRALRCTGVALSVAAGLLGAC
LPGTGARIIALVGGPCTEGPGMIVSKDLSEPVRSHKDLDKDATPHFHKAVKFYDNLAKQL
VSQGHVLDVFASALDQVGVAEMKVVVERTGGLVVLAESFGHPVFKESFKRIFEDSEKSLG
LSFNGTLEINCSKDIKIQGIIGPCTSLEKKGALCADTVVGQGNTSQWKMCGLDRRTCLTV
FFDISPSDKSNQPGIPNQQLYIQFVTNYQNSEGQMRLRVTTVMRKWVDDSSNTEELVDGF
DQETAAVVLARYISLKMEMEEEFDATRWLDRSLIRLCSRFGDYRKDDPSSFVINPNFSLF
PQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRESITNSAGMIQPSLLAYSFNGPPTPALL
DVASIAADRILLLDAYFSVVVFHGMTIAQWRNLGYHNQPEHQAFAQLLQAPLDEAQMIIK
DRFPVPRLVVCDQHGSQARFLLVKLNPSANYNSAHEMSPGADVIFTDDVSLQVFCEHLRR
LAVQS
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgactttcgctgaaaacaattggtatgtcacgtttgactctcggcaggtgaag
agtgatgatcagatctttgggatatcacagcgggtggagagtgatgctactccacaaaaa
cctccattttttcttctctctcttcgtctctgcttctccccttcgatccccaatccatgg
cggagactaccaccgcggcgcgccccgtcccgccaccgccgcatccccgacgggcccgac
ggcgtccgcaatgacgtggaaccccgatctaaggttgaggcttcgaaatgcgtggttcct
atcgccgcctcgatcgccccgatccgatccagtcccgatctcgtcaccctcccctacgcc
cctctccgatgcaagcccccgtgctccgccgtcctcaacccttactgcagcgtcgatttc
aacgccaagatctggatctgccctctctgcttctcccgaaaccagttcccccatcattac
gccgggatctcggagtccaatgtccccggagagctctacaatcagtgctccaccgtcgag
tatgccctcgattcgtcggccgtgggccccgctctgccgccggtgtttctttttgtcctc
gatacgtgtctcatcgaggaggagctcgaatttgcgaagggcgatgcggcgggcgagttg
gcaatgcggtgggcgattggattgctgcccgagaatgccctagttgggttgattacttat
gggacgcaggtgcatttgcatgagttgggctttgccgatatttccaagctgtatgtgttt
agggggactaaggagatctcgaaagatgagatcttggaacagttgggactgtcgttggcg
gggagagggcttgtgaaaggcggtgtgcagccaaatgggatgccgatggtgcagcagcag
aatgtgatggggtcttcgtcggtgaatcggtttctgttgccggcttcagattgcgagtac
acgctcagtgctttgttggatgagatgcagacggatcaatggcctgtggaggctgggcac
cgggctctgcgatgcacgggtgtcgctctgagtgttgctgctggactgctgggtgcttgc
ttgccgggcactggggctagaatcatagccttggttggtgggccgtgtactgagggcccg
gggatgattgtgtctaaagatctctcagaacccgtccgctcacataaagatcttgataaa
gacgcaactccgcattttcacaaagccgtgaagttttatgataaccttgccaaacagctg
gttagccagggtcatgttttggatgtttttgcatctgcactcgatcaggttggggttgca
gagatgaaagttgttgttgaaaggacaggtggtcttgttgttctagcagagagttttggt
catccggttttcaaagaatctttcaagcgaatatttgaggatagtgaaaagtctcttggc
ctttcattcaacggtacacttgagatcaactgttctaaggacatcaagattcagggtatc
attggtccatgtacatctttggaaaagaaaggagctctttgtgctgatacagtggttggg
caaggaaataccagccagtggaaaatgtgtggactagataggcgtacttgtttgacggta
ttctttgatatatcacccagtgataaatcaaatcagccgggaattccaaatcagcagttg
tacatacagtttgttacgaattaccaaaactctgaaggtcaaatgaggctacgagttaca
actgttatgagaaaatgggttgatgactcttctaacacggaggaattggtggacgggttt
gaccaagagactgcagctgttgtactagcaagatatatctccttgaaaatggaaatggag
gaagagtttgatgcaacgcggtggttggataggtcactcattcgtctatgttcacggttt
ggtgattatagaaaagacgatccttcttcttttgtaattaacccaaatttttcactattc
ccacagttcatgtttaatctgcggcggtcgcaatttgtacaggttttcaacaacagtccc
gatgaaactgcttatttccgtatgttgttgaaccgggaaagcattaccaattctgctggc
atgattcagccttcactgcttgcctattcttttaatggaccgccaactcctgcgctattg
gatgtagcatctattgctgcagatcggatactcttgcttgatgcatattttagtgttgtt
gtttttcatggtatgacaattgctcagtggcgtaatttgggttaccataatcagcctgaa
catcaggcttttgctcagctattgcaagcaccgctagatgaagcacaaatgatcatcaag
gatcgttttccagttcccagattagttgtctgtgatcaacatggctctcaggcgagattt
ctattggtgaagttgaacccatcggctaactacaactcagcgcatgagatgtctccaggt
gcagatgtaatcttcacagatgatgtgagccttcaagtattctgcgagcatctccgtagg
ctggccgtgcaatcgtga
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