Asparagus officinalis (garden asparagus): 109826607
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Entry
109826607 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor RS41
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109826607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109826607
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
SR proteins
109826607
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
DUF2129
RRM_5
SET_assoc
RRM_8
Motif
Other DBs
NCBI-GeneID:
109826607
NCBI-ProteinID:
XP_020249220
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All DBs
Position
10:31943834..32003772
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AA seq
343 aa
AA seq
DB search
MTRVARTANSMDDLMGYAMEYLGGVIPHNAYSGIIQIISSIGDNSGARQSSVQNLKPVIC
GNFEHDARQSELERRLGRYGKVDRVNIKAGFALIYMEDERDAEDAIRGLDRIQFGRHGRR
LRVEWTKEERGGRMSGGERRSSANSRPSKTLFVINFDPVSTRIRDLERHFEPYVKVLNVR
IRRNFAFIQFESQDDATKALEATDVSKIIDRVMSVEYAARDDDERRHGDEKINGYSQDRR
EERSPERRSRDRGRSASPYGRGVESRGAKWACYGVLRFVMQNSNGVLSPYSKPEEQGGSP
NYGRAESPAYDRHRSHSAPPRTQRGELTDLLDPSLTKRIAERG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgactagagttgcgaggacggccaactcaatggacgatctcatggggtatgctatggaa
tatttaggtggtgtgattccccataacgcatatagtggaatcatacagatcataagctcg
attggcgataattccggtgctaggcagagcagcgttcagaacctgaagcctgttatatgc
gggaactttgagcatgatgctcgtcaatcggaacttgagcgccgtttaggaagatatggg
aaggttgatagggtcaatataaaagcaggatttgccttgatttacatggaagatgaacgc
gatgctgaagatgcaattagggggcttgataggatacaatttggtaggcatgggcggcgg
cttcgtgttgagtggacaaaggaagaacgtggtggtagaatgtctggcggtgaaagaaga
tcatcagctaattcaaggccttcaaagacattatttgtcattaattttgatccagttagt
acaaggataagggacttggaaaggcattttgaaccttatgtaaaagttctgaatgtcagg
atcagaaggaattttgctttcatccaatttgaatcacaagatgatgccaccaaagcgttg
gaagctactgacgtgagcaagataatcgatcgggtgatgtcagtggagtatgccgctcgg
gatgatgatgaaagaagacatggcgatgaaaaaataaatggatacagccaagataggagg
gaagagaggtctccagaaaggagaagtcgcgatcgtgggcgttcagctagtccttatggc
agaggcgtggagagtaggggtgcaaaatgggcctgctatggtgttctaaggtttgtcatg
cagaatagcaacggagtcttgagcccttacagcaagcctgaggagcagggagggagtcca
aattatggaagagctgaaagtcctgcttatgacagacatcgcagccacagtgcaccacca
agaactcaaaggggagagctcactgatctcctcgacccgtcactcacaaagaggatcgca
gaaagggggtga
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