KEGG   Asparagus officinalis (garden asparagus): 109826787
Entry
109826787         CDS       T05243                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aof03400]
    109826787
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    109826787
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 DEAD Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 zf-C3HC4_4 ResIII zf-RING_4 zf-ANAPC11 SNX17-31_F2_FERM
Other DBs
NCBI-GeneID: 109826787
NCBI-ProteinID: XP_020249396
LinkDB
Position
10:60716793..60742166
AA seq 1067 aa
MGMFAGQQKSCFFTLFYSRVPPPLPALSVSRNWLPLPVSLSPLSRGYLLATASLLRIGVA
LVALAQPSLSPPGFCGFGPKTSASFPPCPLLKRQVEEPDRGEIPPPAEDNASAGIWTEDE
RLLPSLSSAEAERGVIVLVGKHLELAGLSTCRGRRLNPGDGVSFSFPPLPSHHHQQPTSP
SAAKFPSKRRFSSAAAAASSSSEIVRFSTQDNGEEIGRIPNEWARCLLPLVKENKVRIDG
FCKSAPQVLGIMDTILLSVSVYINSLMFCEHHLRLVKPTAPTTMDTSTVHPLPTLFRLLG
LIPFRKAEFSPGDLYNKKRNIESKDSSGTLGVALPPAKCQNLSSSGNRGKEEDESIPDCE
LETIVGLSDSSQLEELNPPDILQCELRPYQKQALHWMVHMEKGSNLEEAATTLHPCWDAY
RLADKRESVVYLNSFSGEATTIFPSTLQIARGGILADAMGLGKTIMTIALLVTHFGKGGS
CTSSDSQASAVANYSNHIPHKSPNTSKKSKGTSDFSKLLKFKAPLIGGGSLIICPMTLLG
QWKAEIETHVQPGTLTVYVHYGQSRPRDAKFLAQSDIVLTTYGVLASEYSSENSEENGGL
YSVQWFRIVLDEAHIIKSSKSQISIATAALAADRRWCLTGTPIQNKLEDIYSLLRFLRIE
PWGNWGLWHKLIQKPYEEGNERGLKLVQSILRQIMLRRTKSSTDRDGRPIIVLPPARVEI
IYCEMTAAEKDFYDALFKRSKVKFDQFVAQGRVLHNYASILELLLRLRQCCDHPFLVKSR
GDTREFLDLNKLAKRFLQGGKDAIGKESNILQSEAYIKEVVEELRNGEEGECPICLEVYE
DAVLTPCAHRLCRECLLASWSNATTGSCPVCRSIINRQELITAPTSSRFQIDIEKNWIES
SKISVLLQDLENLRSSGSKSILFSQWTAFLDLLEIPLSRRNFTFLRLDGTLNQQQREKVI
NQFTEDDNILVLLMSLKAGGVGINLTAASNAFLLDPWWNPAVEEQAVMRIHRIGQTRTVS
IKRFIVKGTVEERMEAVQARKQKMISGALTDQEVRTARIEELKMLFT
NT seq 3204 nt   +upstreamnt  +downstreamnt
atggggatgtttgcggggcagcagaaatcgtgcttcttcactctgttttattctcgtgtg
cctcctcctctccccgctctctctgtgtctaggaactggctaccccttcctgtctctctc
tctcctctctcacgcggttatctcttggccactgcttccctcctccgcatcggggtcgcc
ctcgtcgcgctcgctcagccgagcctcagtcccccggggttttgcggatttggaccgaag
acgagcgcctccttccctccttgtcctctgctgaagcggcaggtggaagaacctgacagg
ggagaaatcccgccgccggcggaggacaatgcttcagccgggatttggaccgaagacgag
cgcctccttccctccttgtcctctgctgaagcggagcgaggggtgattgtgcttgtgggg
aagcatcttgagttggcggggctatccacctgcagagggaggaggcttaatcctggagac
ggggtctctttctccttccctcctctcccctctcaccaccaccaacaacccacctcccct
tccgccgccaaattcccttcaaaacgtcgcttttcctctgcagcagcagcagcttcctct
tcttctgagattgtccgcttctccacacaagacaacggcgaggagattgggcgaatcccc
aacgagtgggctcgctgccttttgcccctcgtgaaagaaaacaaggtcagaatcgatggc
ttttgcaaatcggctccccaagtcctcggcataatggacaccattctcttgtctgtcagc
gtttatatcaacagtttaatgttctgcgagcaccacctgagattagtgaagcctactgcc
cccacaacaatggatacatccactgtccatcccctgccgacactcttcagactgcttggc
ctcatacccttcagaaaggctgagtttagtcctggggacctctacaataaaaaaagaaac
atagaatccaaggacagttctggaactcttggagttgcattaccccctgctaaatgtcag
aatttatcttcgagtggaaacagaggaaaagaagaagatgaaagcattccagactgtgaa
ctagagactattgtggggctctctgacagttctcaactagaggaattgaatccccctgat
atacttcagtgtgagctacgaccttaccagaaacaggctcttcattggatggtgcatatg
gagaaagggagtaatctagaggaggcagcaacaacccttcacccatgttgggatgcatat
cgtcttgccgataagagggagtctgttgtctatttgaattcattttcaggagaagctaca
acaatattccctagcacacttcaaattgcaagaggaggaattttggcagatgctatggga
ctaggcaagaccataatgaccattgcgcttttggttactcattttggaaaggggggctca
tgtacttcctccgacagccaggcctctgctgtagctaactattccaaccacatcccccat
aaatctccgaacacttcaaagaagtcaaaaggcacatctgattttagcaaattgctgaag
tttaaggctccacttataggaggtggcagcctgattatctgtcctatgacactgctagga
cagtggaaggctgagattgaaacccatgttcaacctggtacactcacagtttacgttcac
tatggacagagtagaccaagggatgcaaagttcttagctcagagtgacattgttctgaca
acatacggtgtgttggcatcagaatattcatctgagaattctgaagagaatggagggctt
tactcagtgcagtggttcaggatagttcttgatgaagcacatattataaagtcatccaag
agccaaatttccatagctacggctgcactggctgctgacagaagatggtgccttacgggt
actcctattcagaataaactggaggatatatacagtcttcttagatttttgagaatagaa
ccttggggaaactgggggctgtggcataaactcatccaaaagccttacgaggaaggcaat
gaacgtggtttgaaattggtgcagtccatactaaggcaaataatgctaagaaggacaaaa
tctagtacagatagagatggcaggccaattattgttcttccaccagcacgtgttgagata
atttattgcgagatgacagcagctgagaaggacttctatgatgcattgtttaaaagatcc
aaggtgaagtttgaccagtttgttgcacaaggacgggtccttcacaattatgcttcaata
ttggaattgcttttacggcttcgtcagtgctgcgatcacccatttctcgtgaagagtcgt
ggtgatacccgagagttcttagatctgaacaagcttgctaagcgtttcctgcaaggcggt
aaggatgctattggtaaagaatccaacattctacaatcagaggcctatattaaggaggtt
gtggaggaattacgtaatggtgaagaaggggaatgtcctatttgcctggaagtatatgaa
gatgcagtattgacaccctgtgctcaccgcctctgtcgagagtgtctcttggccagctgg
agcaatgctacaactggctcttgtcctgtttgtaggagtatcatcaataggcaggagcta
ataactgcacccaccagtagccgcttccaaattgacattgaaaaaaactggattgaatcg
tcaaagatttccgttcttttacaggatctggaaaaccttcggtcttcaggatctaaaagt
attttgttcagccaatggactgcatttttggatcttcttgagattcctctttcaaggaga
aacttcacatttcttcgtttggatgggacgttaaatcagcaacagcgagagaaagtaatc
aatcagtttacagaagatgataacattctggtattactgatgtctttaaaggctggtggt
gttggaataaaccttacggcagcatctaatgcctttttgttggatccctggtggaaccca
gctgttgaggaacaagctgtcatgcgcattcatcgcattggtcaaactagaactgtttca
atcaaaaggttcattgtaaagggaacagtagaagaaagaatggaagctgtgcaggcacga
aagcagaagatgatctctggagcactgactgaccaggaagttcgtactgcaagaatagag
gaactaaagatgctcttcacttga

DBGET integrated database retrieval system