Asparagus officinalis (garden asparagus): 109827027
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Entry
109827027 CDS
T05243
Name
(RefSeq) serine/threonine-protein phosphatase PP1(5.9)-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109827027
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aof01009
]
109827027
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109827027
03019 Messenger RNA biogenesis [BR:
aof03019
]
109827027
03041 Spliceosome [BR:
aof03041
]
109827027
Enzymes [BR:
aof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
109827027
Protein phosphatases and associated proteins [BR:
aof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
109827027
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109827027
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109827027
Spliceosome [BR:
aof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109827027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
Metallophos
HEAT_EZ
HEAT_2
ARM_ARMC5
HEAT
ZER1-like_2nd
Motif
Other DBs
NCBI-GeneID:
109827027
NCBI-ProteinID:
XP_020249584
LinkDB
All DBs
Position
Unknown
AA seq
187 aa
AA seq
DB search
MHGGLSPNLSNLDQIKSLPRPTDVPDTGLLCDLLWPDPGREIQGWGMNDRGVSYTFGADK
VAEFLTNHDLDLVCRAHISYEANSVYGLVSYLTRANLRYLSEGCPSIEEVIHSGVVPRFV
EFLVREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVRLLASPSDDVREQLMEC
PSSHDKN
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcatggcggtctttccccaaatttgtcaaacctggaccagattaaaagcttaccacgt
cctaccgatgtccctgatactggtttattgtgtgacctgctttggcccgatcctggtagg
gaaattcaaggatggggaatgaatgatagaggggtttcgtacacttttggtgctgataaa
gttgctgagttcttgacaaatcatgatctggatcttgtctgtcgtgcacatataagttat
gaggcaaatagtgtttacggattagtgagttatttaacaagagctaacttacgatatttg
tcagagggatgtccctcaatcgaggaggttatccattctggtgttgttcctcggtttgtg
gagttccttgtcagagaggattttcctcaattacagttcgaagcggcttgggctcttact
aatattgcttcggggacttccgagaacactaaggttgtgattgatcatggtgctgtgcct
atctttgttaggcttcttgcttcgccgagtgatgatgttagagaacagcttatggaatgc
ccctcttcacatgataaaaattga
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integrated database retrieval system
