Asparagus officinalis (garden asparagus): 109827156
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Entry
109827156 CDS
T05243
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109827156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109827156
03110 Chaperones and folding catalysts [BR:
aof03110
]
109827156
03029 Mitochondrial biogenesis [BR:
aof03029
]
109827156
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109827156
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109827156
Messenger RNA biogenesis [BR:
aof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109827156
Chaperones and folding catalysts [BR:
aof03110
]
Heat shock proteins
HSP60 / Chaperonin
109827156
Mitochondrial biogenesis [BR:
aof03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109827156
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109827156
Exosomal proteins of other body fluids (saliva and urine)
109827156
Exosomal proteins of breast cancer cells
109827156
Exosomal proteins of colorectal cancer cells
109827156
Exosomal proteins of bladder cancer cells
109827156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
109827156
NCBI-ProteinID:
XP_020249710
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGKSAENSLYVVEGMQ
FDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITNARDLIHILEDAIKGGYAILIIAEDI
EQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLSLDQADK
EVLGTAAKVVLTKDSTTIVGDGSTQEEVNKRVAQIRTLVENAEQEYEKEKLNERIAKLSG
GVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLD
DAEQKVGADIVKRALSYPLKLIAKNAGVNGSVVTEKVLSSDNLKYGYNAATGAYEDLMAA
GIIDPTKVVRCCLEHAASVAKTFLMSDVVVVDIKEPEPVAAGNPMDNSGYGY
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggaggttgaagacagtgaacttgcagatgtggctgcagttagtgctggaaat
aactatgaaataggaaacatgatagctgaggctatgagtaaagtaggtaggaagggagtg
gtgacactagaagaaggaaaaagcgcagagaatagcctttatgttgtggagggaatgcaa
tttgatcgtggttatatttctccttactttgtcactgacagtgaaaaaatgtcagttgaa
tacgataactgcaagctgctccttgttgacaagaagatcacaaatgcgagagatttgatc
catattttggaagatgccataaaaggcgggtatgcaatattaataatcgccgaagacatt
gagcaggaagccctggccactcttgttgtgaataagcttagaggagctctcaagattgct
gcacttaaagctcctggatttggagagcgcaagagtcagtaccttgatgacattgcaatt
cttactggagggactgtcatcagagatgaagttggactttctctggatcaagcagacaag
gaggtcttgggtactgctgctaaggttgtcctaaccaaagactcaaccacaatagttggt
gacgggagcacccaagaagaggttaacaaacgagttgctcagattcgaactcttgttgag
aatgctgagcaagaatatgaaaaagaaaagcttaacgagaggattgctaaactctctggt
ggtgttgctgtcatccaggtgggagcacaaacagaaactgagctaaaggagaagaaattg
agagttgaggatgccctaaatgctacgaaggctgctgttgaagaggggattgtggtcggt
ggaggctgcacgcttcttaggctggcagcaaaagttgatgctatcaaggatactcttgat
gatgctgagcaaaaggtaggtgcagatattgtcaaaagggctttgagctacccactgaaa
ctgattgctaaaaatgctggagttaatggtagtgtggtcactgagaaggtgctgtcaagc
gataatctgaaatatggctacaacgcggcaactggtgcttatgaggatttgatggccgca
gggattattgaccccacaaaggttgtgaggtgttgcttagagcatgcagcttcagttgcg
aaaacattccttatgtcagatgttgtggttgttgacatcaaggagcctgagcctgttgct
gcggggaacccaatggacaattcaggatacggttattag
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