Asparagus officinalis (garden asparagus): 109827195
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Entry
109827195 CDS
T05243
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109827195
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109827195
Complex C
U4/U6.U5 tri-SnRNP related factors
109827195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G_like
Motif
Other DBs
NCBI-GeneID:
109827195
NCBI-ProteinID:
XP_020249752
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MEEGELVDKRDNRLKKGEREQKDESPRRLERYRDERRHRDEEDERRDGRARKRERESSPR
RRDRNRDDDHHHRQKEKSREEAKEESKEEKPVAVQQMPDAGEIKTGGIYIPPHRLAQMMK
DVEDKSSEQYQRLSWDALRKSINGLVNKVNATNIKNIIPELFSENLIRGRGLFCRSCMKS
QMASPGFTDVFAALVAVVNTKFPDVGKLLLKRIVIQLRRAYKRNDKPQLLATTKFIAHLV
NQQVAHEIIALELLTLLLEKPTDDSVEVAVGFVKECGALLQDFSPQGVHGIFERFRSILH
EGEIDKRVQFLIEGLFATRKAKFQGFPAIRPELDLVEQEDQFTHEVSLEDEIDWETNLDV
FKPNPQFLEDEKAYEDLKRNILGDESSDDEQGSDASSEDEDEEESEEDDEESMRIKDETE
TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGL
LGQRFCMINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTYALPWHVLAYIH
LTEENTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQDSLESIFPKDNPKNTRFAIN
FFTSIGLGGITESLREYLKNMPRLIMQQQKPISESDDDSGSSTASSSGESSSDSDSSSGS
ESDSSSSDESNRRARHSKRRKRN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggtgagcttgtggataagagagacaatcgcttaaaaaagggggaaagagag
cagaaagatgaaagccctcgaaggctagagaggtatcgagatgagagaaggcatagggat
gaagaagatgagaggagagatgggcgagctaggaaaagagaaagagagagcagtcctcga
aggagagacaggaacagagatgatgaccaccatcatcggcaaaaagagaagagcagagag
gaagccaaagaagagagtaaggaggaaaagcctgttgcagttcagcagatgccagatgca
ggtgaaatcaagacgggtggaatctacatcccaccacatagactggctcagatgatgaag
gatgtagaagataagagcagtgaacaataccagagattgagttgggatgctctaaggaag
agtattaatgggctggtgaacaaagtgaatgctactaatattaagaatataattccagag
ctcttctcagagaacctcattcgagggaggggtttgttctgtcgctcatgtatgaagtcg
cagatggcatctcctgggtttactgatgtatttgcagctttggttgcggtggttaatacc
aagtttcctgatgtgggtaagcttctattgaagaggattgtgatacagcttaggagggct
tataaaaggaatgacaagcctcagctacttgctacaactaagtttatagctcatcttgtg
aatcagcaagtagctcatgagatcattgctttggaactgctgactttgctattggagaaa
cccaccgatgatagtgttgaggtagctgttgggtttgtgaaagaatgtggcgcattgctt
caagacttttcacctcaaggagtccatggtatctttgagcgctttcgtagtatccttcat
gaaggggaaattgataagcgtgttcagttcttgattgaaggtctgtttgcaacaagaaaa
gccaaatttcagggattccctgctatccggccagaactggacctagtggagcaagaggat
cagtttacacatgaagtatctcttgaagatgagatagattgggagacaaatctagatgtt
tttaagcccaatccacaatttttggaggatgagaaagcttatgaagatctgaagagaaat
atccttggagacgagtcctctgatgatgaacaaggctctgatgcatcctcggaagacgag
gatgaagaagaatctgaagaagatgatgaagaaagcatgagaataaaagatgaaacagaa
actaatcttgtcaatttacgaagaacaatctatctcacaataatgtcaagtgtggatttt
gaagaggctggtcataagctattaaaaatcaaacttgagcctggacaagagatggaacta
tgcatcatgctgcttgagtgttgcagccaagagagaacttaccttcggtattatggtctt
ctgggccaacgtttctgcatgatcaacaaagtataccaagagaactttgagaagtgtttt
gtacagcaatactctatgattcatcgcctggaaacaaacaagctgaggaacgtggcgaag
ttctttgctcatttactaggcacatatgcgctaccctggcatgttcttgcctacatacac
ttgactgaggaaaacacaacttcttcttctagaattttcataaagatcctttttcaggaa
ctttcggaacatcttggtatacgattgcttaatgagcgtctaaatgatcctacaatgcaa
gactcacttgaatccatttttccaaaggacaaccccaagaataccagatttgccatcaac
tttttcacgtccattgggctgggtggcattacagagagcttgcgtgaatatttaaagaac
atgccccgcctcataatgcagcaacaaaagccaatctcagaatctgatgatgattcagga
agttctactgcttctagttcaggtgaatccagctccgactcagattcttcttcaggatct
gagtctgactcgagctcttctgatgaaagcaatagaagagcgagacatagtaagagaagg
aagaggaattga
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