Asparagus officinalis (garden asparagus): 109827444
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Entry
109827444 CDS
T05243
Name
(RefSeq) intron-binding protein aquarius
KO
K12874
intron-binding protein aquarius
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109827444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109827444
Spliceosome [BR:
aof03041
]
Complex B
Other components
Prp19-related factors
109827444
Complex C
109827444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_12
AAA_11
Aquarius_N_3rd
AAA_19
AAA_30
ResIII
UvrD-helicase
AAA_22
SLFN-g3_helicase
UvrD_C_2
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
109827444
NCBI-ProteinID:
XP_020250043
LinkDB
All DBs
Position
Unknown
AA seq
1523 aa
AA seq
DB search
MPKVYRRPPQALLTVRLPGPPPRVAEYAADNLSLALLPPPESVPASTLSSSITLLDIQRD
RLTKIATANWLKADREFDPQLVKGIYESELLVSGGRKTVPLQRVMILEVSQYLENYLWPN
FDPETATFEHVMSMILMVNEKFRENVAAWVCFYDRRDAFKGFLQRVLRLKEQGRTLSIVE
KTNYLLFMINAFQSLEDEIVSETVLKLVSLQLWHSLSFGRFQMELCQNPHLIKKWKKLTK
KEAKEAKKAGHPFDPSSMLEVTFLRNMIEEFLEILDSKVIPRMQIDDEDQVDDSCVLYCE
RFMEFLIDLLSQLPTRRFLKAVVADVAVVSKCRLSALYHHHEKGRLFAQLLDLLHFYEGF
EIDDHVGTQLSDDDILLAHYSRMQAFQLLAFKQVPKLRDLGMCHIGAIHKRDDLSKKLSI
LSSEELEDLVCNKLKLVSDEDPCAKRRDFLEEVIVSFFEKRQSQKEAINALPLYPNEKIM
WDESVVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLL
AYINNEGETAFRGWSRMAVPIKEFRIAEVKQPNIGEVKPASVTARVTFSISSYKAHIRSE
WNALKEHDVLFLLSIRPSFEPLSAEEAANSTVPERLGLQYVRGCEVIEICDEEGVLMNDF
TGRIKRDEWKPPKGELRTLTLALDTAQYHMDMTDIAEKRAEDVYGTFNVLMRRKPKENNF
KAILESIRDLMNEYCIVPDWLHNIFLGYGNPSAAQWTNMPDLLEVVDFKDTFLDANHLRE
SFSDFQVSFVRQDGAEDPSPHPPFWIKLPKAIKSNTHALPGNKSRNAKSLNDGNMGDEGS
EKEKIFIEHYIPADPGPYPQDQPKQNSVRFTPTQIGAIISGIQPGLTMVVGPPGTGKTDT
AVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELATDLDF
SRQGRVNAMLVRRLELLGEVERLARSLNLPEDVGYTCETAGYFWLLHVYSRWEQFLAACS
QNQDKPTFVKDRFPFTDFFSNAPQPIFTCESFERDMRAAKGCFRHLSTMFQELEECRPFE
LLKSTADRANYLMTKQAKIVAMTCTHAALKRKDFLQFGFKYDNLLMEESAQILEIETFIP
MLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNA
QGRARPSIAKLYNWRYRDLGDLPYVREDPIFHKANAGFSYEYQLINVPDFRGKGESAPSP
WFYQNEGEAEYIVSVYMYMILLGYPPSKISILTTYNGQKLLIRDVISRRCTSCGIPPPSK
VATVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFEQCYEL
QPTFQLLLQRPERLALHLDEMSPFTERLVGETGRIHFVNDIQEMESLVGFRMHQLSQAQL
MIHQYGAPQEPIPHADRPQIQDSENRVEDTNMSVKNGDIGSLPPQVQDSENLVEDMNMSV
EDGDVGNLPPENGSMDQNGEMEE
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggtctaccgcaggccgcctcaggcactgttgactgttcgacttccggggccg
ccaccgcgtgtcgccgagtacgccgccgacaacctctccttagcccttctgccgccgccg
gagagtgttcccgcctccaccctctcgagctccatcactctcctcgacatccaacgcgat
cgcctcaccaagatcgccaccgccaactggctgaaggcggaccgagagttcgatccccaa
ctcgtgaaggggatctatgagtccgagcttctcgtttctgggggtaggaagactgtgccg
cttcagagagtgatgattcttgaagtgagccagtatctggagaattatttgtggcctaat
tttgatccggagacggcgacgtttgagcatgtgatgtccatgattcttatggtcaatgag
aagtttcgggagaatgtagcggcatgggtttgtttctatgatcgaagggatgcgtttaag
gggttcttacagagggttcttcggcttaaagagcagggaagaactttgagcattgtggag
aagacaaattacttgcttttcatgattaatgcctttcagagtttggaagatgagattgtc
agcgaaactgttctgaagttagtaagcctgcagctttggcacagtctatcatttggcaga
ttccagatggagttatgccaaaatccccatctaatcaagaagtggaagaaattgaccaag
aaagaagctaaagaagccaagaaagcaggacatccatttgatccttcgtcgatgcttgaa
gtgacatttcttaggaatatgattgaagaatttttggagatacttgactctaaggtaata
ccacgtatgcaaattgatgatgaagaccaagttgatgattcatgtgttctatattgtgag
aggtttatggagttcctaattgatctattgagccaactgcctactaggagatttttgaag
gctgtcgttgctgatgttgctgttgtgtccaaatgccgtctaagtgcactttatcatcat
cacgagaaaggtcgtctttttgcgcaactactagacttgcttcacttttatgaaggattc
gagattgatgatcatgttggaacacaacttagtgatgatgatatcctgcttgctcattat
tctcgtatgcaagctttccaactactggcatttaaacaagtacctaagttacgagatctt
ggaatgtgccatattggtgcaatacacaagcgtgatgatctttcgaagaagttatctata
ttatcttccgaggaactggaagacttggtctgtaataagctgaagctggtttctgatgaa
gacccgtgtgctaaaaggcgtgactttctcgaggaagttatagtctctttctttgagaaa
cgtcaatctcaaaaggaagcaataaatgctcttcctctctacccaaatgagaaaataatg
tgggatgagagtgttgtcccaagtatcaattattcaggagaaggatgtcttgctcttcca
aagcttaacctccagtttttaacacttcatgattacctattacggaatttcaaccttttc
cgtcttgaatcaacatatgaaatccgtgaagatatccaagaagctgttccacatcttctt
gcatacattaataatgagggagaaactgcttttcgtggatggtcgagaatggcagttcca
atcaaggaatttagaattgctgaagtgaaacagccaaacattggagaagttaaacctgct
tctgtaactgcacgagttactttcagcatctctagttacaaagcacatataagatctgag
tggaatgccttgaaagagcatgacgtcctatttttattatcaattcgtccatcatttgaa
cctcttagtgctgaggaagctgctaattctactgtacctgagaggcttgggcttcaatat
gtacgtggatgtgaagtaattgagatctgtgatgaggaaggcgtacttatgaatgatttc
actggccggattaaaagagatgaatggaaaccgcctaaaggtgaacttcgtacacttacc
cttgccctggatactgcacagtatcacatggatatgactgatattgctgaaaagagagca
gaggatgtttatgggacttttaatgttttaatgagaagaaagcctaaagaaaataacttc
aaagcaattttagagtccatacgtgaccttatgaatgagtattgcatagttcctgattgg
ttgcataatatatttttgggctatggaaatccttctgctgcacagtggacaaacatgcct
gatctgctggaagtggtggatttcaaagatacatttctcgatgccaaccatttgagagag
agtttttctgattttcaggtctcctttgttcgccaagatggtgcagaggacccctctcca
catccccctttttggataaagcttccaaaagcaattaaaagcaacactcatgctcttcca
ggcaacaaatccagaaatgcaaagtccttgaatgatggaaacatgggagatgaaggttct
gagaaggagaaaatttttattgagcattatatccctgctgatcctgggccttatccccaa
gatcagccaaagcaaaactctgttagatttacaccaacacagattggagcaatcatttca
ggtattcagcctggattgactatggttgtaggtccaccaggtactggaaaaacagacaca
gccgtccagatacttaatgttctttaccacaactgcccttcacaaagaacattaatcatc
acccattccaatcaagctctgaatgatctttttgagaaaatcatgcagagggatgtccct
gctagataccttcttcggctggggcaaggtgaacaagagctggcgacggatcttgatttt
agccgtcaaggtcgtgtcaatgctatgctggtccggcggctagaattgcttggtgaagta
gaaaggcttgcaaggtccctaaatctaccagaggatgtaggttacacttgcgaaactgca
ggatacttttggttgcttcatgtctactcccgttgggaacaatttctagctgcatgttca
caaaatcaagataaaccaacatttgttaaagaccgctttccatttacggatttcttttca
aatgctcctcaacccatttttacctgtgaatccttcgagagagacatgagagctgctaag
ggttgctttcgtcatctctccacaatgtttcaagaacttgaagaatgcagaccgtttgag
ttgctcaagtctacagctgatcgagcaaactatctgatgaccaaacaggcaaaaattgtt
gccatgacatgtactcatgctgccttaaagaggaaggatttccttcaatttggattcaaa
tatgacaacttgttaatggaggagagtgctcaaatacttgagatagagacatttattcct
atgttacttcaaaggcaggaagatggttatgctcggcttaagcgttgcatattgattggt
gatcatcatcagcttcctccagttgttaaaaatatggcctttcagaagtatagtcatatg
gatcaaagtcttttcacaaggtttgtacgtcttgggatcccttatatagagcttaatgcg
cagggtagagctcgaccaagtattgccaaactttacaattggagatatagagatttaggc
gaccttccttatgtaagggaggatcctatttttcacaaagctaatgctggattctcttat
gagtaccagctgataaatgtgccagatttccgtggaaaaggtgaaagtgcaccatctcct
tggttctatcagaatgaaggggaggctgagtatattgtcagtgtttacatgtatatgatc
ttgcttggatacccaccgagtaagatttcaatattaaccacttacaatggccagaagctt
ttgattagggatgttatcagtagaagatgcacgtcatgcggaattcctccccctagcaag
gttgcaacagttgataaatttcaaggtcagcagaatgatttcatcttattgtcgcttgtg
cgcactcgatttgttggccaccttcgtgatgttaggagactggttgttgctatgtctcga
gcacggctgggcctctatgtgttttgccggcgttctctatttgaacaatgctatgagtta
cagcctacatttcagcttttgcttcagagacccgaacgcctagcattgcatctagatgag
atgagtcctttcactgagcggcttgttggagaaacaggacggattcattttgttaatgac
atccaggagatggaaagcttggttggtttcaggatgcatcagctgtcccaggcccaatta
atgatccatcagtatggagcacctcaagagcccatcccccatgcagatagacctcagatt
caggattctgagaaccgggttgaggatactaatatgtctgtgaaaaatggtgatataggg
agtttaccaccacaggttcaggattctgagaacctggttgaggatatgaatatgtcagtg
gaggatggtgatgtagggaatttaccacctgaaaatggttcaatggatcagaacggtgag
atggaggaatga
DBGET
integrated database retrieval system
