Asparagus officinalis (garden asparagus): 109827614
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Entry
109827614 CDS
T05243
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109827614
Enzymes [BR:
aof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109827614
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
LEF-9
Motif
Other DBs
NCBI-GeneID:
109827614
NCBI-ProteinID:
XP_020250222
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Position
1:89652580..89655595
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AA seq
445 aa
AA seq
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MECSRPITLLFLVPFLTLALASKSAHKETDEEYWKRREHEAQVIAKATYVPDPFSVTNAF
NAAVRKDLDKSKNKTRRGLSGSVGTNTCYATNPIDRCWRCRADWAENRQRLANCAKGFGR
KAYGGGKKSEIYVVTDSSDEDMENPKPGTLRWGVIQEKPLWIIFSSDMTIVLKQELIVTS
WKTIDGRGARVEIAHGAGITIQFVSNVIIHGLHIHHIQSENGGIIRDSVIHEGLRTQSDG
DGITIFGASNVWIDHMTMSHGADGLVDVIYGSTGVTISNSYFTEHDKVILCGADKRHTMD
AFMQVTIAFNHFGHKCKQRMPRVRYGFVHVVNNDYTEWGISAIGGSDHPTIISQGNRYTA
NPDIGPKEVTHRDYAAEWEWKSWNWTTEGDVFRNGAFFRKSGVRSSLELTKNYSRFDVFR
AKPGTFVTRLTRFVGALSCKVGEPC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggagtgttcgagacctatcaccttgttgtttttagtcccatttctcacattggccttg
gcgtcaaaatcggctcataaggagactgatgaggagtattggaagaggagagagcatgaa
gctcaagtaatagcgaaggccacttatgttccagatcctttctctgtcaccaacgctttc
aatgcagcagttcgcaaggacctagacaagagcaagaacaaaacaagaaggggcctcagc
ggctctgtgggaaccaacacctgctatgccaccaacccgatcgaccgctgctggagatgc
cgagcagactgggccgaaaaccgccagcgccttgctaactgtgcaaagggtttcggccgc
aaggcctatggtgggggcaagaagagcgagatctacgtcgttaccgatagctcagacgag
gacatggagaatcctaaacctggtacgctccggtggggagtcatccaagaaaagccattg
tggatcatattttcttcagatatgaccatcgttctcaagcaagagctcattgtcaccagc
tggaagaccatcgacggacgaggcgcccgtgtcgaaattgcccacggcgcaggtataaca
atccagttcgtctccaacgtcatcatccacgggctccacatccaccacattcaatcagaa
aacggggggataatacgagacagtgtcatccacgaaggcctcaggacacagagcgacggc
gacggcatcaccatcttcggggcgtccaacgtgtggatcgaccacatgacgatgtcgcac
ggcgctgatgggcttgtcgacgtgatctacgggtcgacgggagtgactatatccaatagc
tacttcacggagcacgataaggtgattctttgcggagccgacaagaggcacaccatggac
gccttcatgcaggtcacgatcgcgttcaaccactttggtcacaagtgcaaacaaaggatg
cccagagtgaggtacgggttcgtgcacgtcgtcaacaacgactacacggagtgggggatt
tcagcgatcggcggcagcgatcatcccacaattatcagccaagggaacagatatactgct
aacccggacattggtcctaaagaggtgacccatagagattatgcagcggagtgggagtgg
aagagctggaactggacgaccgaaggcgatgttttcaggaacggcgcctttttcagaaag
tcgggggtaaggagctccctcgagctcacgaagaattactcaagattcgatgtgttcaga
gcgaagcctggaacatttgtcaccaggctcacacgctttgtcggggcgcttagctgcaag
gttggggagccatgctaa
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