Asparagus officinalis (garden asparagus): 109827701
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Entry
109827701 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 1B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109827701
03036 Chromosome and associated proteins [BR:
aof03036
]
109827701
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109827701
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109827701
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109827701
microRNA pathway
RISC loading complex
109827701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
109827701
NCBI-ProteinID:
XP_020250305
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MCYLSVHVHELFLLLVFRHNESVCSALKFGMDNNMVRKRRTDLPGTREMSETQEQTGSGG
RGPQHPPERAPVHHQQGRGGGRGSGPFQPQQSQYGGRGGGYYHGRGGGPQHRGGMSTQYH
GAPTSEYQGHGGPQHPEYQGHGGPPYPQYQGRGGPQPRGGMPQQQFYGGQRGNGAGLSAA
GPSRPPAPELHQAIEGPAYQPVQSSVSQPSSSSRTQEMDVARVTQQVEQLSVHHEAGTSQ
AIQPVASSKSMRFPLRPDKGKFGQRCVVKANHFFAELPDKDLHQYDVSITPEVTSRGVNR
AVIAELVRLYRETHLGGRLPAYDGRKSLYTAGPLPFPSKEFQVTLTDEDDGTGKERRQRP
FKIVIKFASRADLHHLAMFLSGRQADAPQEALQVLDIVLRELPTARYCPVGRSFYSPDLG
RRQQLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDTSRPLS
DSDRVKIKKALRGIKIEVTHRGNMRRKYRISGLTSQSTRELSFPVDERGTMKSVVQYFHE
TYGFTIQRMNWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPRD
RELDIVETVHHNAYHRDPYAQEFGIKISNKLAQVEARILPAPRLKYHDTGRERDCLPRVG
QWNMMNKKMVNGGRVSSWMCINFARNVEENVARGFCHELAQMCQISGMQFSLEPVLPPLT
ARPDHVERALKARYHEAMTILHPQKKELDLLVVILPDNNGSLYGDLKRICETELGVVSQC
CLTKHVFRMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHP
GEDSSPSIAAVVASQDWPEITKYAGLVCAQAHREEMIQDLYKEWKDPQRGPVSGGMIKEL
LISFKKATGEKPQRIIFYRDGVSEGQFYQVLLHEVEAIRKACASLEVNYQPPITFVVVQK
RHHTRLFAENHSNQHSVDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHV
LWDENKFTADGLQSLTNNLCYTYARCTRSVSIGKLLHCHLTFFVGVFKMRLTMGK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtgttatctttcagttcatgtacatgagttgttcctattgttggtcttcagacacaat
gaatctgtttgttctgcattaaagtttggcatggacaacaatatggtaaggaagagaaga
acggacctccccggcactcgggagatgtcggaaacacaagagcaaactggaagtggtggg
cgtggacctcagcatcctcctgaaagagccccagtccatcatcaacagggacgtggtgga
ggacgaggttcgggtcctttccaaccccaacagtcacagtatggaggtcgtggcggagga
tactatcatggtcgcggtggcggcccacaacatcgtggagggatgtccacacagtaccat
ggagccccaacttctgaataccagggtcatggagggcctcaacatcctgaatatcagggc
catggagggccaccatatcctcaataccagggccgtggagggccacagccgagaggtggt
atgccacagcagcagttttatggtgggcaaaggggtaacggggctggcctctctgctgct
ggcccgtcgaggccgccggcacccgagctgcaccaagctatagagggtccagcttaccag
cctgtccagtcatctgtatcacaacctagctcatcttcaagaacacaggagatggatgtt
gctcgagtaacgcaacaagttgaacaactttctgttcatcatgaagctggaacaagccag
gccattcagccagttgcgtctagcaaatccatgagatttcctttgcgaccggacaagggc
aagtttggtcaaaggtgtgtggtgaaggcaaaccacttctttgctgaacttcctgataaa
gatcttcaccagtacgatgtttcaattactcctgaagttacttcacggggtgtgaaccga
gcggttatagcagagctagtgaggctttaccgtgagacccatttaggaggtcgtctgcca
gcatacgatggaaggaaaagcctttatactgctggaccattaccctttccctccaaggaa
tttcaagttacactgactgatgaagacgatggtacaggaaaagagaggaggcagaggcct
tttaaaattgtaataaaatttgcttcccgtgctgatctccatcacctagcaatgtttcta
tctgggagacaggctgatgctcctcaggaagctcttcaagttcttgatatcgttctgcga
gagttgcctactgccaggtattgccctgttggccggtcgttttactcaccagatcttgga
aggcggcagcaacttggtgacgggcttgagagttggcgaggtttttatcagagtattcgc
ccaacacagatgggcctttctttaaatattgatatgtcgtcaactgccttcattgagcca
ctgccagttatcgattttgtaactcagcttctgaaccgtgacacgtcacgaccgctgtct
gattctgaccgcgtcaagattaagaaggcccttagaggcataaagattgaggttactcat
cgtggaaacatgagaagaaagtatcgtatatctggtttaacctcgcaatccactagggag
ctgagttttccagttgatgaaagagggacaatgaagtctgtggtgcagtatttccacgag
acttatggttttactatccaacgcatgaactggccatgcttgcaagttggcaatcagcag
cggccaaattatctgcccatggaggtttgcaagattgtggaaggtcaaaggtactctaag
aggttgaatgagaagcagataactgctctccttaaggtcacttgccaacgtcctcgggat
cgcgagcttgatattgttgagacagttcatcataacgcataccatcgagatccttatgca
caagaatttggaattaaaatcagcaataaacttgcacaagttgaggcccggattttgcct
gcacctcggcttaaataccacgatactggaagggagagagattgcttaccgagagtagga
caatggaatatgatgaacaagaaaatggtgaatggtgggagagtgagcagctggatgtgt
attaattttgctcgcaatgttgaagagaatgttgctcgtgggttctgccatgaactagct
caaatgtgccagatttctggaatgcaattttctttagagcctgtgcttcccccattaact
gctcgtcctgatcatgttgaacgagctttaaaagcacgctatcatgaagcaatgaccata
ctgcacccccagaagaaagaactggatctgcttgttgtgatattgcccgacaacaatgga
tctctttatggggatctaaaaaggatttgtgaaactgagcttggggtagtatcccaatgc
tgtctcacaaagcacgtatttaggatgagtaagcagtatcttgcaaatgttgctcttaag
ataaatgtaaaggttggtggaagaaacacagttctcgttgatgctatttctaggcgcata
ccactggttagcgacaggcctacaattatttttggtgcagatgttactcatcctcatcct
ggagaagattccagcccttctattgcagcagttgttgcctctcaagactggccggagatc
acgaagtatgcaggattggtttgtgctcaggctcatcgtgaggagatgattcaggatctt
tataaggagtggaaagatcctcagagaggacctgtctctggtgggatgataaaggaactt
cttatttcgttcaaaaaagcaactggagagaagcctcaaagaattatattttacagggat
ggtgttagtgaagggcaattctatcaagtcttactgcatgaagttgaagctatacgaaag
gcatgtgcatctctggaggttaattatcagccaccgataacctttgtagtggttcagaaa
cgtcaccacaccaggctgtttgctgaaaatcattcaaaccagcattcagtcgataggagt
ggaaacattttgccaggaactgttgtcgataccaagatctgccatcctaccgaatttgac
ttttacttgtgcagtcatgctggtatccagggcacaagccgtcctgctcactaccatgtt
ttatgggatgagaacaagttcactgctgatggactgcagtcacttacaaacaacttatgc
tacacttatgcaagatgcactcgttctgtatccattggtaagctgcttcattgccatctt
actttttttgttggggtctttaagatgcgtttgacaatgggaaagtaa
DBGET
integrated database retrieval system
