Asparagus officinalis (garden asparagus): 109827778
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Entry
109827778 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: cyclin-H1-1-like
KO
K06634
cyclin H
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03022
Basal transcription factors
aof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109827778
09124 Replication and repair
03420 Nucleotide excision repair
109827778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109827778
03400 DNA repair and recombination proteins [BR:
aof03400
]
109827778
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109827778
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109827778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
109827778
NCBI-ProteinID:
XP_020250383
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MADFQTSTHRAKWIFTPQELMEKREAANQRAIKMLEQYGSTRVEVDIDGSLSYPKPLQGN
AERHSLPKPLNCEEEQFMRVFYEQKIQEVCGAFRFPHKIQATAIIYFKRFYLQCSVMEHQ
PKHIMLTCIYSSCKVEENHVSAEELGGIQQDHQXILNNEMIVLQNLGFDLIVYAPYRSIE
GFVEDMQEFCQARDNEQEKLKELQEAAKSEVDRMMLTDAPLLFPPGQLALAALHRSNEVL
GALNFERYLESMLSRQGVHTTTELAQTMSSIELLLAKLKIPTAKDMRHIDRKLKSCWDPS
SKDESKKREKKSKHKSKRTAAEMQGEPA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttccagacctctactcatcgtgcaaagtggattttcacccctcaggaactg
atggagaagcgtgaagctgcaaatcaaagagctataaaaatgctggagcagtatggttcc
acgcgtgtggaggtggatattgatggttcactgtcatatcctaagcctttacaaggcaac
gctgaacgacactctcttccgaaacctcttaattgtgaagaggagcaattcatgcgggta
ttttatgaacagaaaattcaagaagtttgtggagcatttagattccctcataaaattcag
gcaacagccataatatacttcaaaaggttttatttgcaatgttctgtaatggagcatcaa
ccaaaacacataatgctaacttgcatatattcttcctgcaaggtagaagaaaatcatgtt
tctgctgaggaacttggtggaattcagcaggatcatcaantaattcttaataatgagatg
attgttctccagaatttgggatttgatcttattgtttatgcaccataccggtcaattgaa
ggctttgttgaggatatgcaggagttctgccaagcaagggacaatgagcaagaaaaatta
aaggagttgcaagaagctgccaaatcagaggttgataggatgatgctgacggatgcacct
cttctcttcccccctgggcagttggcattggctgctttgcacaggtcaaatgaagtactc
ggagctctcaattttgaaagatacttggagagtatgctatctcggcagggagttcacacc
acaacagagcttgctcaaaccatgtcatccattgagcttttgctggcaaaactaaaaatt
ccaactgctaaggatatgaggcatattgatcgaaaattaaagagctgctgggatcctagc
tcaaaagatgaaagcaagaaacgagagaagaaatcaaagcacaagtcgaaaaggacagct
gctgagatgcaaggcgaaccagcataa
DBGET
integrated database retrieval system
