Asparagus officinalis (garden asparagus): 109827779
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Entry
109827779 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109827779
Enzymes [BR:
aof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
109827779
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Other ribosome biogenesis factors
109827779
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
FtsJ
Ubie_methyltran
PCMT
Methyltransf_31
RsmF-B_ferredox
RsmJ
Methyltransf_4
Motif
Other DBs
NCBI-GeneID:
109827779
NCBI-ProteinID:
XP_020250388
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Position
1:90682711..90704638
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AA seq
491 aa
AA seq
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MAPNKRMSSKNAAERSAYFARREAAARKCWQGAADRAASASHQSIVXRPLRSNKKATFAL
VCQTLKYLPILKQILAASSVLNSKWKKQEELIYVTSYDILFGQEVATSGAAEKFLMHSKN
SLQSALAKLLVREKTKNIEDLLLKNHSPVCSKPRYVRVNTLKMDVETAVHGLESITKVAK
DDMVPDLLKLPSGTDLHDHPLVTSGSVVVQGKASSMVAVALCPQPGWEVLDACAAPGNKT
VHLAALMKGMGNIIACELHKERARLLEDTIRRTGAPNVNIFQGDFLDLDARDPKFSKIRA
ILLDPSCSGSGIARERLDYLLPSFKKGEDGDAANSQRVRNLAAFQTKALLHALSFPAVER
VVYSTCSIHQAENEDVISSVLPFATSIGFELATPFPQWPHRGLPVFNGAEHLLRTDPTEE
TEGFFIALFARKSETNKSEEAPEESHIQKLPHPSTKKICRMRKPTPFLPLRKMLQYNAIP
LLRHNRKRKRI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaacaaacgaatgagcagcaaaaacgcggcggagcgatcggcgtacttcgct
cgcagggaggcggcggcgagaaagtgctggcagggcgcggccgaccgcgcggcctccgcc
tcccatcaatccatcgtctagcggcccctccgttcgaacaagaaggccaccttcgccctc
gtttgccaaaccctaaaatatcttccaattctcaagcaaattttagccgcaagcagtgta
ttgaacagcaagtggaagaagcaagaggagttaatatatgtaacttcatatgacattcta
tttggacaggaagttgcaacgtcaggtgctgcagaaaaattcttaatgcattccaaaaac
tcccttcagtctgctttggcaaagcttcttgtgagagaaaagacgaaaaatattgaagac
ttgctcctaaagaatcatagtcctgtatgttccaaacctaggtatgttcgtgtgaataca
ctcaaaatggatgtggagactgcagttcatgggttagaatcaatcactaaggttgcaaaa
gatgacatggttccagacttactaaaacttccctctgggactgatttacatgatcatcct
ttggttacaagcggaagtgttgtcgtgcaaggcaaagcaagttctatggtggccgttgcc
ctgtgccctcagccaggatgggaggttctagatgcctgtgctgctcctggaaataaaact
gttcaccttgctgcactaatgaaaggaatgggaaatattatagcatgtgaacttcacaag
gaaagggctagacttctagaagatactatcaggcggactggagctcctaatgtgaacata
tttcaaggtgattttttagatttagatgccagggatcccaagttttcaaagatccgtgct
attctcttggatccttcttgctcagggtctggaattgccagagaaagattagactatttg
ctcccttcattcaagaaaggggaagacggtgatgctgctaattctcagagagtaaggaat
cttgctgctttccaaacaaaagctcttcttcacgccttatcatttcccgcagttgagaga
gttgtatacagcacatgttcaattcatcaagcagaaaatgaagacgtcatcagttcagtt
ctcccctttgccacctctatcggttttgaactggcaactcctttcccgcagtggcctcat
cgtggcctccctgtcttcaacggtgctgaacatttgctaagaacagatccaaccgaagaa
acggaaggattctttattgcactatttgctaggaaaagtgagacgaataaatctgaggaa
gcacctgaagaatcacacattcagaagttacctcatccctctacaaaaaagatttgcaga
atgcggaagccgactccattccttccactaagaaagatgttgcaatataatgccatccca
ctcctgagacataatagaaaaagaaaaagaatatga
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