Asparagus officinalis (garden asparagus): 109827787
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Entry
109827787 CDS
T05243
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109827787
Enzymes [BR:
aof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
109827787
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Other ribosome biogenesis factors
109827787
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_25
FtsJ
Ubie_methyltran
Methyltransf_31
PCMT
Methyltransf_4
RsmJ
Motif
Other DBs
NCBI-GeneID:
109827787
NCBI-ProteinID:
XP_020250395
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All DBs
Position
1:90708710..90714136
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AA seq
317 aa
AA seq
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MCITMSHKILIHLQTGLGLLLFVYFTIDIYLFFPSKGKASSMVAVALCPQPGWEVLDACA
APGNKTVHLAALMKGMGNIIACELHKERARLLEDTIRRTGAPNVNIFQGDFLDLDARDPK
FSKIRAILLDPSCSGSGIARERLDYLLPSFKKGEDGDAANSQRVRNLAAFQTKALLHALS
FPAVERVVYSTCSIHQAENEDVISSVLPFATSIGFELATPFPQWPHRGLPVFNGAEHLLR
TDPTEETEGFFIALFARKSETNKSEEAPEESHIQKLPHPSTKKICRMRKPTPFLPLRKML
QYNAIPLLRHNRKRKRI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatcactatgtcacataagatattgattcatctgcagacaggtttaggattactc
ctctttgtttacttcactattgatatttatttgttctttccttctaagggcaaagcaagt
tctatggtggccgttgccctgtgccctcagccaggatgggaggttctagatgcctgtgct
gctcctggaaataaaactgttcaccttgctgcactaatgaaaggaatgggaaatattata
gcatgtgaacttcacaaggaaagggctagacttctagaagatactatcaggcggactgga
gctcctaatgtgaacatatttcaaggtgattttttagatttagatgccagggatcccaag
ttttcaaagatccgtgctattctcttggatccttcttgctcagggtctggaattgccaga
gaaagattagactatttgctcccttcattcaagaaaggggaagacggtgatgctgctaat
tctcagagagtaaggaatcttgctgctttccaaacaaaagctcttcttcacgccttatca
tttcccgcagttgagagagttgtatacagcacatgttcaattcatcaagcagaaaatgaa
gacgtcatcagttcagttctcccctttgccacctctatcggttttgaactggcaactcct
ttcccgcagtggcctcatcgtggcctccctgtcttcaacggtgctgaacatttgctaaga
acagatccaaccgaagaaacggaaggattctttattgcactatttgctaggaaaagtgag
acgaataaatctgaggaagcacctgaagaatcacacattcagaagttacctcatccctct
acaaaaaagatttgcagaatgcggaagccgactccattccttccactaagaaagatgttg
caatataatgccatcccactcctgagacataatagaaaaagaaaaagaatatga
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