Asparagus officinalis (garden asparagus): 109827864
Help
Entry
109827864 CDS
T05243
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03018
RNA degradation
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109827864
09123 Folding, sorting and degradation
03018 RNA degradation
109827864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109827864
03041 Spliceosome [BR:
aof03041
]
109827864
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109827864
mRNA degradation factors
5'-3' decay
Lsm complex
109827864
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109827864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
GDE_C
Motif
Other DBs
NCBI-GeneID:
109827864
NCBI-ProteinID:
XP_020250473
LinkDB
All DBs
Position
Unknown
AA seq
105 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEAKNRTDRKPPGVGRGRGRGREDG
NT seq
316 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctttcacttctaaagaccgctcaagggcatcccatgttggtggagctgaag
aatggggagacttacaatgggcacttggtgaattgcgacacgtggatgaacattcatctc
cgtgaagttatttgtacttcaaaggatggagataggttttggaggatgcctgagtgttac
attcgtgggaatacgatcaagtaccttcgagttcctgatgaggtgattgacaaggttcaa
gaagaagctaagaaccgtacagataggaaaccacctggtgtgggtcggggaaggggaaga
ggcagagaagatggag
DBGET
integrated database retrieval system
