Asparagus officinalis (garden asparagus): 109827879
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Entry
109827879 CDS
T05243
Name
(RefSeq) transcriptional elongation regulator MINIYO
KO
K20826
RNA polymerase II-associated protein 1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109827879
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109827879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_N
RPAP1_C
Motif
Other DBs
NCBI-GeneID:
109827879
NCBI-ProteinID:
XP_020250492
LinkDB
All DBs
Position
1:90962390..90974894
Genome browser
AA seq
1473 aa
AA seq
DB search
MATRKPSPSPSSSTKKVEQLPLAPNIVGSIIEKGFSSSSSSSATNPPNPSVLPFPVARHR
SHGGPWSGASASEEPRFDVGDAAEEENDADHVSASSFADPIKGKKKKGLDFSRWRELQQV
DENKSQMKKAEAKSVTRKRVTVPETENATKKAVTVPETEIMAKNGEGSRNFAASVVSSSS
AVGCGEGEPETSVSNGSEKPTLMDEIEAENLARLSEMSGDEIAEAQAEIMEKMDPGVLEM
LKKRARNXXXXKMGALGGESIMTSESSDNKTWKIWSESVEKVRELRFALDGSVVDTGSSH
SQLNGNKLDSTQYSVENVAERDFLRTEGDPAAVGYTIKEAVALIRSVVPGQRVLALQLLA
SVFTKTICNMQGKDGGYGMGKVNSVDKLINWQAVWAFALGPEPEMALSLRIALDDNHNSV
VLACAKVIQCMLSCDINESFFNITEKVPNSEKYLCTAPVFRSKPEIDDGYLHGGFWKYNT
KPSNIMPSNDVMVDEENEGGHTIQDDVVVSGQDVAAGFIRMGILPRICYLLEMDPLAALE
ECLLSILIALARHSLTSADAIMRCPRLIETVIKIYTKHGTAEIPVQIKAIILLKVLFQSN
KQTCSEFVKRGIFQQAMWQWYRSAFTLEHWVETGREQCKLTSNLMVEQLRLWRVCICYGY
CITYFADFFPAMCLWLGVPAFDKLIENHVLAEFASITREGYLVLEALAQRLPILHSVDQL
KRQAMDTSDANLEAWSWSHVIPMVDLAMGWLTLKNIPFVSSVVGCHKRSMNALDPSASSL
TWVISAVLHMLASIFDRIAPIGTDRMHNKSTHLPWLPEFVPQISLEIIRNGFLSFLAPRD
VKPVEFPTGGGSLVDGLCYLRQQSDIGASLSSVSCLHGLLRLAFSIDRCIEGAKNVCYSR
PSDVDRSERAGKILEEGVVKWAKNDFMGILSVFMNTVSEEWLLVQSAETFGRGGPAPGIG
FGWGAPKGGYWSLDVFLAQMDAHLIIELFEFLSTIIEEDLALIEGMMNSESSARLTVASQ
RINSVLAVCLITGPRDRGTLEKALDVLLRAPVLKYLSLCIHSFLQRGKGRKSFDWQYKEV
DYGSFSEVLKSHFRNRWISIKKKSSVKEDRGSNNHEKPSKSNILETIHEDEEILGASKIS
DGSCLLIEWARQRLPLPGHWFLSAICSIGTRTTSLSTNVRDVAKSGLFFLLGLESVSHLL
SSDDQQSPVSGVSLVWKLHALSMSLHANMDVLDDEESRDVFEALQELYGQHLEKLRYRDI
EHPHRNQEYLNFQTQIHGSYTTFVENLVEQFGAISYGDIIFGRQVGLYLHQSVEQPVRLA
AWNALSNARVLELLPPLEKCLGEPEGYLMPVEEDEGILEAYVKSWSSGALDRATTRETIS
FTLAMHHISSFVFNLNASEKSSLQRKLARSLLRSYLQKRHQEGMLLRFFRYKLPLPDAQL
YETESGRRLDLLKEACEGNSSLLSAVNKLKSAV
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagaaaaccctcgccctcgccctcctcatcaacgaagaaagtagagcagctc
cctctcgcccccaacatcgtcggtagcataatcgagaagggcttctcctcctcctcctcg
tcctccgccaccaacccccccaacccctccgtcctccccttccccgtcgcccgccaccgc
tctcacggcggcccgtggtcgggtgcgtcggcgagcgaggagcccagatttgatgtgggt
gatgcggcagaggaggagaatgatgctgatcacgtgtcggcatcgtcgtttgcagaccct
atcaaggggaagaagaagaagggtctggatttcagcaggtggagagaacttcaacaggtc
gatgagaacaagtcacaaatgaagaaagcggaagctaaaagcgtcacaaggaaacgagta
actgtacctgaaactgaaaatgccacaaagaaggcagtaactgtacctgaaaccgaaatt
atggcaaaaaatggagagggtagtagaaattttgcagcttctgttgtgtctagtagcagt
gcagttggttgtggcgaaggggaacctgagacatcggtctctaatggatcggagaagccc
acactgatggacgagattgaagctgagaatcttgctcggctgagcgagatgtcgggggat
gagatcgcggaggcacaggcggagataatggagaagatggatccgggcgtgcttgaaatg
ctaaagaagcgtgcacgaaatannnnnnnnnnaaagatgggggctttaggtggagaatcg
attatgacaagcgaaagtagtgataataagacgtggaaaatttggagtgagagtgttgag
aaggttagggagctgaggtttgcgttagatggtagcgttgttgatactggttccagtcac
agtcaacttaatggtaataagctcgattcgactcaatacagtgttgagaatgtagctgaa
cgtgattttttacgcacggagggggatcctgctgctgtgggatatactatcaaagaagca
gtagcacttatccggagtgtggttcctgggcagcgggtgcttgccttgcagcttcttgct
tctgtattcactaagactatttgcaacatgcaaggaaaggatggtgggtatggaatgggg
aaagttaattctgttgacaagctcattaactggcaggctgtttgggcatttgctcttggc
cctgaacctgagatggctttgtcgctaaggattgctttggacgataaccacaactctgtg
gtcttggcttgtgccaaggtgatacagtgcatgttgagctgcgatataaatgagagcttc
ttcaacatcacagagaaagtgcctaattcggaaaaatatctttgcactgctcctgtattt
cggagtaaacctgaaatagatgatgggtatcttcatggtggattttggaaatataataca
aagccttcaaacataatgccttctaatgatgtgatggtggatgaggaaaatgagggagga
cacactatccaagacgatgttgttgtttctggtcaagatgttgctgctggattcattagg
atgggaatactgccaagaatttgctatcttttggagatggatcccctcgcggcattagaa
gaatgtctgctttccatacttatagctttagcaagacactcccttacaagtgcggatgca
attatgagatgcccaaggctcattgaaactgttattaagatatacaccaagcacggaaca
gcagaaattccagttcagataaaagcgattatccttctaaaagtcttgtttcaatccaac
aagcaaacctgctcggagtttgtgaaacgtggaattttccagcaggcaatgtggcaatgg
tatagaagtgcatttacccttgagcattgggttgaaactggaagggagcagtgtaaactc
acatccaacttgatggttgagcaattacgcctttggagagtttgtatttgttatgggtat
tgcataacttactttgcagatttcttccctgctatgtgtttgtggctgggtgttcccgca
tttgataaactaattgagaaccatgttcttgccgaatttgcttccatcacaagggaagga
taccttgtcctggaggctttagctcaaaggctaccaattctccattcagtggatcagcta
aagagacaagccatggatacttctgatgctaaccttgaagcttggtcttggagtcatgtg
atcccaatggtcgacttagctatgggatggttaacattgaagaatattccatttgtatct
tctgttgttggttgtcacaagagaagtatgaatgcccttgatccttctgcaagttcattg
acttgggtgatctcagcagtactacacatgcttgctagtatatttgacagaatagccccc
attggaactgatagaatgcacaataaatctactcatttaccatggcttcctgaatttgtt
cctcaaatcagcctggagattatcagaaatgggtttctgagtttccttgctccgagagat
gtgaaacctgtagagttccctactggaggtggctctttggtggatggcctttgttacttg
agacaacaaagtgatatcggtgcatcattatcttctgtaagctgccttcatggattattg
cggcttgctttttcaattgatcgttgtattgagggagcgaaaaatgtgtgctattctcgg
ccctcggatgttgataggtcagaaagagcagggaagatattagaggaaggtgtagttaaa
tgggctaaaaatgacttcatgggtatcctgtctgttttcatgaacacggtttctgaagaa
tggctcttggtgcagtctgctgagacatttggcagaggaggacctgcccctggaatagga
tttggctggggtgccccaaagggaggatattggtccttggatgtttttctagcacaaatg
gatgcacatttgatcatagaattgtttgaattcttatcgacgattatcgaggaagacctt
gcacttatcgaaggcatgatgaattctgaaagttctgctagactgaccgttgcttcacaa
agaattaattctgttcttgcagtatgtttgattacaggacctagagatagaggtaccttg
gagaaggcactagatgtactgctccgagctcctgttctcaaatatcttagtctatgtata
cattcatttcttcaacgtggtaaaggtcgcaagtcatttgactggcagtacaaggaagtt
gactacggttctttcagtgaggttctaaaatcgcatttcagaaacaggtggataagtata
aaaaagaaatcatcggtaaaagaggacagaggcagcaacaatcatgagaaacccagtaaa
agtaatattcttgaaacaattcatgaagacgaagaaattttgggcgcgtccaaaatttca
gatggcagttgtttgctaatagagtgggcacgccaaagactacctcttccagggcattgg
tttcttagtgcaatctgtagtattgggacaagaactactagcttatctactaatgttcgt
gatgtggcaaagagtggacttttctttctattaggtcttgagtcagtgtctcatcttctg
agttctgatgatcagcagtctccagtttctggtgtttctctagtctggaagcttcatgcc
ttatctatgtctttgcatgctaatatggatgttcttgatgacgaagaaagtagggatgtg
tttgaagctctacaagaactgtatggccaacatctcgagaagttgagatatagagatatt
gaacatccacacaggaatcaggaatatctgaacttccaaacacaaattcatggaagctat
actacatttgttgagaatcttgtggagcaatttggagctatatcttatggtgatataata
tttggaaggcaggtaggactttatttgcaccaatctgttgagcagccagtgaggcttgct
gcatggaatgcattatctaatgcccgtgtccttgagctcttgccaccgttagagaagtgt
cttggtgaacctgaaggatacctgatgcctgttgaggaagatgaagggattttggaggca
tatgttaaatcatggagttcaggagctctcgatagagctaccactcgagaaaccatcagt
ttcacattggctatgcatcacatttcttcttttgttttcaaccttaacgcctctgagaaa
tcatcattgcagcgtaagttggcaaggtctcttcttcgcagctatttgcagaagcgacat
caagagggaatgctattgagattttttagatataaattgcccttgccagatgcgcaactg
tacgaaactgaaagcggaagaagactcgatctattgaaggaagcttgtgaaggaaactct
tctcttctgtctgcagtaaacaagctaaagtctgctgtatga
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integrated database retrieval system
