Asparagus officinalis (garden asparagus): 109827899
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Entry
109827899 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109827899
Transcription machinery [BR:
aof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
109827899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
109827899
NCBI-ProteinID:
XP_020250513
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MGVVTVSSSASRSATTSPLGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLDQQP
KRQRKRPSKSKPNKSKKPDADLDYNEVAAALENLYKLSPPADVAEEKKVEIDVVRNRKRR
PKRLGLEKRVEAMRKRSREGEIGGGSSKKEEEEEIDRLVREYSVSTDLGSLDWRRVKIPP
VLGSAEHTRLFKLMQPMKAISEVKENLHKDLNKEPTEGELAAAVNMTVSELRKHIEVGQA
ARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYG
LFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELIIELNRLPTEEEIIARVGISPE
RYHDVMRASKSVFSLNSRHVVTQEEFINAITDVDGVGGDKRRQPALLRLALDDVLDSLKP
KESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLDYLRRYI
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgaccgtatcgagctccgcctctcgctctgcaactacatcgccattgggc
ctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatcccgctcgatcagcagccc
aaaagacaacgaaagcggcccagtaaatcgaagcccaataaatcaaagaagcccgacgcc
gatttagactacaatgaggtggccgctgcgctcgagaacttatataagcttagcccgccc
gctgacgtggccgaagagaagaaggtggagatcgatgtcgtgagaaataggaagaggagg
ccaaagaggctgggactagagaagagagtagaagcgatgaggaaaaggagtagagaaggg
gaaatcgggggtggttctagtaaaaaggaggaggaggaggagatagatagattggtgaga
gagtattcggtgtcgacggatttggggagcttggattggaggagggtgaagataccgccg
gtgcttggatcagcggagcatactcggcttttcaaactgatgcagcctatgaaggcaata
tctgaggtgaaggagaacttacataaagatttaaataaggagccaacagaaggcgaattg
gcagctgcagtgaacatgactgtgtcagaattaagaaaacatatagaggttggtcaagca
gcaaggaacaaactaatcaagcacaatctgcggttggttttgtttgtaatcaacaagtat
tatcaagaaatagcaagtggtgacaaatttcaggatctctgccaagctggagtgaagggt
ctaattacagccattgaccggtttgagccaaagcgtggcttccgtctgtccacatatggt
ctcttctggatccggcattccataatccgatccatgacaacatcaagcttcacacgggtc
tcctttggaatagagtcggttagacaagagattcagaaagctaaattggagttgataatt
gagcttaatagattgccaaccgaggaagagatcatagccagagtaggaatttctcctgag
agataccatgatgtcatgagggcctcaaagtcagttttttcgctcaattcaaggcatgta
gtcacacaagaagaatttatcaatgccataactgatgttgatggcgtgggaggtgacaag
cgtagacagccagcacttcttcggcttgctcttgatgatgtgttagattcactcaagcct
aaggagagcttggtgatcagacaaagatacggactcgatggcaaaggtgatcgaaccttg
ggagagattgcaggaaacctgaatatatccagagagatggtccgaaagcatgagctcaag
gctctaatgaagctcaagcatccagctcgacttgactaccttcggagatacatctaa
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