Asparagus officinalis (garden asparagus): 109827914
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Entry
109827914 CDS
T05243
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109827914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109827914
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109827914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_At5g56370
LRR_4
LRR_14
LRR_6
Motif
Other DBs
NCBI-GeneID:
109827914
NCBI-ProteinID:
XP_020250525
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MVVDDEVLEMIGRRFRNLRVLGFSSCEGLSTAGLATVAANCRYLRELDLQENEVEDNCCH
WLSHFPETFTSLVVLNIACLEGEVNMSVLERLVSRCPNLRTLRLNHAVPLDRLANILQKA
PQLVDLGTGRFAADAGPELYAKLHSAFTGCKSLRSLSGIWEAVPSYLPTLYSVCAGLTSL
NLSYANLQNSEITKLVSQCKNLQRLWVMDLIEDTGLEAVASSCKHLQELRVFPSDPYGAA
QPVALTERGLVAVCTSCPHLHSVLYFCRQMTNSALETIANHRPNLIRFRLCIIDPCTPDY
LTFQPFDAGFTAIVESCKNLRRLSLSGLLTDRVFKSIGASADCLEMLSIAFAGDSDAGLH
YILSGCKSMRKLEIRDCPFGDKPLLANAEKLETMRSLWMSSCNLTLGACRTLARRMPRLN
VEVIDESGGLKWDPSMPDDFPVEKLYVYRTLAGRRSDSPSFVYTL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggacgacgaggtgctggagatgatcgggaggaggtttaggaatctgagggtg
ttggggttttcctcctgtgagggccttagtactgcggggttggcgaccgttgctgctaac
tgcaggtatctcagggaactcgacttacaagaaaatgaggtggaagataactgctgtcac
tggctcagccacttccccgaaacattcacctccctcgtggttctcaacattgcatgcctc
gaaggagaagtaaacatgtcagtcctcgagaggctggtgagcagatgtccaaacctacga
accctaaggctcaaccacgccgtgcctcttgataggcttgccaacattctacaaaaagct
ccgcagcttgttgatcttggtactggcaggtttgcagcggatgcggggccagagctttat
gctaagcttcattctgcctttaccggctgcaagagcttgagaagtttgtctgggatatgg
gaagcggttccttcgtaccttccaacgctttattctgtctgtgctggtctcacttcattg
aacctgagttacgctaatttgcaaaattcagagattacgaagctagttagtcaatgcaag
aatctgcagagattatgggtgatggatttgatagaggacaccggcctcgaagccgtagca
tcctcctgcaagcaccttcaagaactccgcgtcttcccttctgatccatacggcgctgcc
cagcctgtcgccctcaccgagcgcggccttgtcgctgtctgcacctcctgccctcatctc
cattctgtcctctacttctgccgccagatgaccaactctgccctcgaaaccatcgccaac
caccgcccaaatctcatccgcttccgcctctgcatcatcgacccctgcacccctgactac
ctcaccttccaacccttcgacgctggttttaccgccatcgtcgagtcctgcaagaacctc
cgccgcctctcgctctctggcctcctcaccgaccgagtcttcaaatccatcggcgcctct
gccgattgcctcgagatgctttccattgccttcgcaggcgacagcgacgccgggcttcac
tacatcctttctggctgtaaaagcatgaggaagcttgagataagggattgtccatttgga
gacaagcctctgctggcaaatgctgagaaactcgagacaatgcgatccctttggatgtcg
tcgtgcaatttgaccttgggggcatgcaggacgctggcgaggaggatgcctaggttgaac
gtggaggtgatcgacgagagtgggggattgaagtgggatcctagcatgcccgatgacttt
cccgtcgagaagctctatgtttacaggactctagctggccggaggtcagactcgccgtcg
tttgtctataccttgtag
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