Asparagus officinalis (garden asparagus): 109828049
Help
Entry
109828049 CDS
T05243
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109828049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109828049
03009 Ribosome biogenesis [BR:
aof03009
]
109828049
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109828049
Spliceosome [BR:
aof03041
]
Complex A
U1 snRNP components
U1 related factors
109828049
Complex B
109828049
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Helicases
109828049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
109828049
NCBI-ProteinID:
XP_020250672
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MATAEVAPSYAPEDPSLPKPWTGLIDNSTGALYYWNPETNVTQYEKPVALPPTSASGPLS
ASTPKLAPIPTARSQAPNDTASQNELGWQMPQQQHMHQQPSQQQHMHQLPSQQQHMHQQP
SQHTHHMLNQPPSQPMHHMPDQPTQHYPHLQGNHMGHTQFPKINEHSVPHYQPQGLPTGN
HQVQQNGFPIERDVRRQVPEPVGFTAPPIQQSNGASGDRQFPGPAPHIPGAADYSIGPGQ
YIGRPSSTGTGGAYSELQQVRTDATYGQQPLGGPTVSKQNGNAMNQPLMGPKLGYNDEHS
GRGNNDFYPSSGNEGPVMLPHQQQHGGFPHAGNQQGIRMGAAGRDHAGFALAHMGPSQKM
FGSADFTNAPSADSYCQHHEITVTGDNIPAPFMTFEATAFAPELLREIRAAGFSAPTPIQ
AQTWPIALQSRDIVAIAKTGSGKTLGYLLPAFVHLKQCRNNPQIGPTVLVLSPTRELATQ
IQDEAIKFGRSSRISCTCLYGGAPKGPQLREIERGVDIVVATPGRLNDILEMKKINFSQV
SFLVLDEADRMLDMGFEPQIRSIVREIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNI
GNEELSANKAITQHVEIVLPMEKQRRLEQILRTQERGSKIIIFCSTKRLCDQLARSMRGY
GAAAIHGDKSQGERDYVLNQFRCGKAPILVATDVAARGLDIKDIRVVINYDFPTGIEDYV
HRIGRTGRAGATGIAYTFISDQDWKHAAELIKILEGANQRVPPQVRVHASSRSSYPLPAA
AGGFKPLAFGGQNDFGGCGALRRTLVGVESIKGLVGGLVDAVEVTLECARRPVERRGRSY
SRSPDRVRTWGYDSSDDSRSRSRSRSWSRSRSRSRSRSRSLDRPQRARRPSGFDVVPLSA
PAMPMVPPGSAPAVSAADPSQHVE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcagaagttgccccttcctatgcgcctgaagatccaagccttccgaagcct
tggacaggattgattgataacagcactggtgctttgtactactggaatccagagacaaat
gtcacccagtatgagaaaccagtggctttgccgccaacctcagcatcgggtccactgtca
gcctctacacctaaactagcaccaatccctacagctcgttctcaggcaccaaatgacact
gcaagtcagaatgagttgggctggcagatgccccaacagcaacacatgcatcagcagcct
agtcagcagcagcacatgcatcagctgcctagtcagcagcagcacatgcatcagcagcct
agtcaacatacacatcatatgctgaatcagccacctagtcagccgatgcatcatatgccg
gatcagccgacccagcactatccacatttgcaggggaatcatatgggacacacacaattt
cctaaaataaatgagcattcagtgcctcactatcagccccaagggttgccaactggcaat
caccaagtgcagcaaaatggatttccaattgagagggatgtaaggagacaagtgccagag
ccggtggggtttactgcaccgcctatccaacagagtaatggggcatcaggtgatcgtcaa
tttccaggcccagctcctcatattcctggggctgcagattattcaattggcccaggacag
tatattggcagaccatcatctactggcacgggtggtgcttatagcgagttgcagcaggtg
aggacagatgcgacctatggacaacagccacttggtggccccacagtttctaagcaaaat
ggaaatgcaatgaatcaaccgctcatggggccaaaattgggatacaatgacgagcacagt
ggaagagggaataatgacttttacccatctagtggtaatgaagggcctgtgatgctccca
catcaacaacagcatggaggcttccctcatgcaggaaaccaacagggtatcagaatgggt
gctgctggccgcgatcatgcggggtttgctctagctcacatgggaccctcccaaaaaatg
tttggctctgcagatttcactaatgctccatctgctgattcctattgccagcatcatgag
attactgttacgggtgataatattcctgctccattcatgacctttgaggctactgctttt
gctccagagcttctcagagagatacgtgctgctggattctcggctcccactccgatacaa
gcgcaaacatggcccatcgcactacaaagcagggatattgtggccatagccaaaactggc
tctgggaaaaccttgggttatcttcttccagcatttgttcatttaaagcaatgtcgaaat
aatcctcaaattggtccaactgtgttggttctatctccaactcgggaacttgccacccag
attcaagatgaggcaatcaaatttggtcgctcatcaaggatctcttgcacttgtctgtat
ggaggtgctccaaagggccctcagctcagggagatcgagaggggtgtcgatattgttgtg
gctacgcctggtcggctcaatgacatacttgagatgaagaagatcaattttagtcaagtc
tcctttcttgttcttgatgaagcagaccgaatgcttgacatggggttcgaacctcaaatt
cgtagcattgttagagagattcctccacgcaggcagactcttatgtacacagcaacttgg
ccgaaggaggtgagaaaaatagctggagatctactagtaaatcctgtccaggttaacatt
gggaatgaggaactttctgcaaacaaagcaatcacacagcatgtggagattgttttgccg
atggagaaacagagacggttggagcagattcttagaactcaagagcgtggatcaaagatt
atcatcttctgttcgacaaagaggctctgtgaccagcttgctcgctctatgcgtggttat
ggcgctgctgctattcacggagacaagtctcagggtgaaagggattatgtcctgaaccag
tttcgttgtggcaaagcaccgattttagtagctactgatgttgctgcccgagggcttgac
attaaagatatcagggttgtgatcaactacgatttcccgaccggcatcgaagactatgtg
caccgaattggacgtactggaagagctggagccacgggaatagcatacacattcatctcc
gatcaagattggaagcatgcagctgaattgatcaaaatcctcgaaggcgcaaaccagcgt
gtccctcctcaggtccgtgtacatgcttcgagccgttcctcctatcctttgccggcggcc
gctggcgggttcaagccgctggcattcgggggccagaatgacttcggtggctgcggggca
ttgaggcgaactctggttggtgtcgagagcatcaagggattggttggtggattggtggac
gctgtagaagtgactttggaatgcgcccggagacctgtagagagaagaggccggagttat
agtagaagtcctgatagagttcgtacatggggatatgatagtagtgatgatagcaggagc
aggagcaggagcaggagttggtcccgaagcaggagcaggagcaggagcaggagtcggagc
cttgataggcctcaaagggctcgaagaccttctgggtttgatgtagtacctttgtcagct
ccggcgatgcccatggtacccccgggaagcgcccctgctgtatctgctgctgaccctagc
cagcacgtcgaatga
DBGET
integrated database retrieval system
