Asparagus officinalis (garden asparagus): 109828095
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Entry
109828095 CDS
T05243
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109828095
Spliceosome [BR:
aof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109828095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
DUF3587
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109828095
NCBI-ProteinID:
XP_020250722
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MAEPSKVIHVRNVGHEIAESDLLQLLQPFGTVTKVVMLRAKNQALLQMYDVSSAAAAMQY
YANVQPSVRGRNVYMQFSSHQELTTMDQNSQGRKGDQDSEPNRILLVTIHHMLYPITVEV
LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSTQCAVQARNNLQGRNIYDACCQLDIQFSN
LNELQVNYNNDRSRDFTNPSLPSEQRGRSSQQGFGDVGGLYAFPHGARAVAFPQMGNAAA
VAAAFGGGLPPGISGTNTACTILVSNLDSEKIDADKIFNLFSLYGNIIRIKILHNKPDHA
LVEMADGFQAELAVHFLKGAILFGRRLEVNYSKFSNITPSADAHEYAGSSLNRFNRNAAK
NYRYCCSPTKIIHISTLPQDITEEDIIAHLEEHGTIVNSKVFEANGKKQALVMFEDEEQA
TEALVCKHASTIDEAIIRISFSQLQNI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgtcgaaggtcattcacgtccgaaacgtcggccacgagatcgccgagagt
gatttgctccagttgttgcagccgtttggaaccgtgacgaaagtcgtgatgctgcgggca
aaaaatcaggctctccttcagatgtatgatgtatcttcagctgctgctgctatgcaatac
tatgcgaacgtgcaaccaagtgttaggggaaggaatgtatacatgcaattttcttcacat
caagaactaacaacaatggatcagaattcacaaggacggaaaggggatcaggattcagaa
cccaatcggatccttttagttacaatacatcacatgctctatcctataactgtggaagtg
ctgcatcaagtgttttctcctcatgggtttgtggagaagatcgtcacatttcagaagtca
gctggtttccaagcccttatacaatatcaatcaacccaatgtgctgtgcaagcaaggaat
aacctgcaaggacgcaatatatatgatgcttgttgtcagctagatatacaattttccaac
cttaatgaactgcaagttaattacaacaatgatcgctctagagatttcaccaatccatct
ttgccttcagaacaaagaggtagatcctcccaacaggggtttggagatgttggaggcttg
tatgcattccctcatggagccagggcagttgcatttccacagatgggtaatgctgcagct
gttgcagctgcatttggtggaggtctgcctcctgggatatctggtactaacactgcatgc
actattctagtatcaaatttggattccgagaaaattgatgcggacaagatttttaattta
ttttccttgtatgggaatattataagaattaaaatactacacaataagcctgatcatgcg
cttgttgagatggcagatggtttccaggctgaattagctgtacatttcttgaagggagct
atattgtttggaaggaggttggaagtgaactattcaaaattctcaaacataacaccatct
gccgatgcccacgagtacgcggggtccagcctgaaccgtttcaaccgcaatgcagccaaa
aactaccgatactgctgctctccaaccaaaataatacatatctccacacttcctcaagac
atcacggaggaagatatcatagcccacttagaggagcacggaaccattgtcaactccaaa
gtttttgaagcaaatgggaagaagcaagctctggttatgtttgaggatgaggagcaagca
accgaggctcttgtttgcaagcacgcaagtactattgatgaggctatcatcaggatatcc
ttctctcagttgcagaatatctag
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