Asparagus officinalis (garden asparagus): 109828096
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Entry
109828096 CDS
T05243
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109828096
Spliceosome [BR:
aof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109828096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
RRM_3
DUF3587
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109828096
NCBI-ProteinID:
XP_020250724
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSTQCAVQARNNLQGRNIYDAC
CQLDIQFSNLNELQVNYNNDRSRDFTNPSLPSEQRGRSSQGFGDVGGLYAFPHGARAVAF
PQMGNAAAVAAAFGGGLPPGISGTNTACTILVSNLDSEKIDADKIFNLFSLYGNIIRIKI
LHNKPDHALVEMADGFQAELAVHFLKGAILFGRRLEVNYSKFSNITPSADAHEYAGSSLN
RFNRNAAKNYRYCCSPTKIIHISTLPQDITEEDIIAHLEEHGTIVNSKVFEANGKKQALV
MFEDEEQATEALVCKHASTIDEAIIRISFSQLQNI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcctataactgtggaagtgctgcatcaagtgttttctcctcatgggtttgtg
gagaagatcgtcacatttcagaagtcagctggtttccaagcccttatacaatatcaatca
acccaatgtgctgtgcaagcaaggaataacctgcaaggacgcaatatatatgatgcttgt
tgtcagctagatatacaattttccaaccttaatgaactgcaagttaattacaacaatgat
cgctctagagatttcaccaatccatctttgccttcagaacaaagaggtagatcctcccaa
gggtttggagatgttggaggcttgtatgcattccctcatggagccagggcagttgcattt
ccacagatgggtaatgctgcagctgttgcagctgcatttggtggaggtctgcctcctggg
atatctggtactaacactgcatgcactattctagtatcaaatttggattccgagaaaatt
gatgcggacaagatttttaatttattttccttgtatgggaatattataagaattaaaata
ctacacaataagcctgatcatgcgcttgttgagatggcagatggtttccaggctgaatta
gctgtacatttcttgaagggagctatattgtttggaaggaggttggaagtgaactattca
aaattctcaaacataacaccatctgccgatgcccacgagtacgcggggtccagcctgaac
cgtttcaaccgcaatgcagccaaaaactaccgatactgctgctctccaaccaaaataata
catatctccacacttcctcaagacatcacggaggaagatatcatagcccacttagaggag
cacggaaccattgtcaactccaaagtttttgaagcaaatgggaagaagcaagctctggtt
atgtttgaggatgaggagcaagcaaccgaggctcttgtttgcaagcacgcaagtactatt
gatgaggctatcatcaggatatccttctctcagttgcagaatatctag
DBGET
integrated database retrieval system
