Asparagus officinalis (garden asparagus): 109828651
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Entry
109828651 CDS
T05243
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109828651
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109828651
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
90S particles
Helicases
109828651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
AAA_22
nSTAND3
ATPase
AAA_16
Rad17
PhoH
T2SSE
TsaE
ABC_tran
AAA_25
AAA_19
Motif
Other DBs
NCBI-GeneID:
109828651
NCBI-ProteinID:
XP_020251191
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MSLAGFIMILTDATFICLLLFQDQNVCNSIVKDMEITSNNKFQHLTAPVVVHVSRPKDIE
LKRRDLPIIMMEQEIMEAVNEHSIVILCGETGCGKTTQVPQFLYEAGFGSKNCNDRKGII
GVTQPRRVAVLATAKRVSFELGYCLGKEVGFQVRHDKRIGDRCSIKFMTDGILLREVQSD
FLLRRYSVIVLDEAHERSLNTDILVGMLSRVIKLREKLYLEQREKILSGVEIDRDKMITK
LKIILMSATLRVEDFISGKKLFHETPPILEVPVRQFPVTIHFSKKTHEDYLGQAYKKVML
IHKKLPPGGILVFVTGQREVEFLCKKLRKASKQLITNNSKRNSDNDGTANLDMEMKDIHE
AFEISTTDQQTDRFSSFEEDDNFPEMDSDSSNSETDSDIGDDTDTETTSEKTDLVLDLLG
DSRGLLSLKASFEALAGKSCNQNSKEEPTAPMHSKEEETQFVPSTMGEQAEPTPVGPLYV
LPLYAMLPASSQLRVFE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggctggattcatcatgatacttacagatgctactttcatctgtttgcttctt
tttcaggaccagaatgtttgtaattcaattgtgaaggacatggaaatcacttcaaataat
aaatttcaacatctgactgctcctgttgtggtgcacgtatcgcggccaaaggatattgaa
ctgaagaggagagatcttccaataattatgatggagcaggagataatggaagctgtaaat
gagcattcaattgtaattttatgtggagaaacaggatgtggtaaaactactcaagtacct
cagttcttatatgaagctggttttgggtcaaaaaattgtaatgaccggaaaggaatcatt
ggtgttacacaaccgcgacgtgtagctgttcttgccactgccaagagagtatcctttgag
ttgggttattgtcttggaaaggaggttggttttcaagttaggcatgataaaaggatagga
gatcgttgctctatcaagttcatgactgatggaattttacttcgagaagttcagagtgac
ttcttactgaggcgttactctgtaattgtcctggatgaggctcatgagagaagtttgaac
acagatatacttgtcggaatgctatctcgagttataaaacttcgcgagaagttatatttg
gagcagcgggagaaaatactttcaggcgtagaaattgaccgtgacaagatgatcactaaa
ttaaagatcatacttatgagtgctacacttagagttgaagacttcatttctggcaaaaaa
ttatttcatgagaccccacctattctggaagttccagtaagacaatttccggtgactatt
catttctcaaagaagacacatgaggattatttaggtcaagcttataagaaggttatgttg
atccacaagaagctaccacctggaggcatactggtatttgtcactgggcaacgggaagtg
gagttcctgtgtaagaagctaaggaaagcatcaaagcaattaattacaaacaattctaaa
agaaactcagataatgatgggactgcaaacctggacatggaaatgaaggatatccatgaa
gcatttgagataagcactacagaccagcagactgacaggtttagttcttttgaagaggat
gataacttcccggagatggattctgattcatctaactcagaaacagacagtgatattggg
gatgatactgatactgaaacaacctcagagaagaccgatttagttctggatcttttagga
gattctagaggtcttttgtcattgaaggcttcttttgaagccttagctggaaaatcatgc
aaccaaaattctaaagaagaaccaactgcaccaatgcattccaaagaagaggagactcag
tttgtcccttccactatgggtgaacaagcggaacctactcctgttggtcctttgtatgtg
ttacccctttatgcaatgctacctgcttcttctcagcttcgggtatttgaa
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