KEGG   Asparagus officinalis (garden asparagus): 109828769
Entry
109828769         CDS       T05243                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109828769
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109828769
   03041 Spliceosome [BR:aof03041]
    109828769
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109828769
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109828769
Spliceosome [BR:aof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109828769
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_RdRP1_2
Other DBs
NCBI-GeneID: 109828769
NCBI-ProteinID: XP_020251281
LinkDB
Position
1:98640684..98650910
AA seq 357 aa
MELSEEKVAAISGVDDEEYEEVEEEVEEEVEEEVIEEVEEEEEERETESKEVVLGNVDSA
GQEMKQGVDGSSSSDSGKIFVGGVAWETTEETFAQYFAKYGEITDSVIMKDKHTQKPHGF
GFVTFADPSVIDKVLEDEHVIDGRMVEVKRTVPREDMSSSRGGPKTKKIFVGGIPPSFTE
DELKEHFSSYGKVVERQIMLDHSTGRSRGFGFVTFESEEAVEKIISEGKMHDLGGKQVEI
KKAEPKKPGFDSVPNGRAAYSAGSANTYGYGADAYGYGGGYRSSSFYYGGRSDGVYGRGY
GYGGALSYGSGFGPSFGGPMYGAGGYGAGTGYGGYGGGYGGGYGGGRGYGRYHPYGR
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggagctctcagaggagaaggtcgccgccattagcggcgtcgacgatgaagagtacgag
gaggtggaagaagaagtggaagaggaagtagaagaggaggtcattgaagaggtagaagaa
gaggaagaggagagagaaaccgagagcaaagaggttgtcttaggtaacgtagatagtgca
ggtcaggagatgaagcagggcgttgatggatcgtcttcgtctgattcaggaaaaatcttt
gttggaggtgttgcttgggagactactgaagagacttttgcccaatactttgcaaagtat
ggagagattaccgactctgtgataatgaaggataagcacacccagaagcctcatggattt
ggatttgtaacctttgctgatccatctgtgatcgacaaggtcttggaagatgagcatgtc
atagatgggagaatggtagaagtgaagaggacagttcccagagaagatatgtcttcatcc
agaggagggcctaagacaaagaaaatctttgtgggtggtatacctccatcattcactgaa
gatgaactaaaggagcattttagctcatatggaaaagttgttgagcgtcaaataatgctt
gaccacagcactggacgatcacgaggatttggctttgtcacatttgaaagtgaggaggca
gttgaaaagataatatcagagggtaaaatgcacgatcttggaggaaagcaggttgagatc
aagaaagccgaacccaagaaacccggtttcgattcagtacccaatggtagagctgcctac
agtgctggcagcgcgaacacatatggatatggggccgatgcttatgggtatggtggtggt
tatcgatcaagcagcttctactacggtggaagaagtgatggagtttatggccgaggctac
ggctatggtggcgccctcagctatggttctggatttgggcctagttttggtgggcctatg
tatggggccggtggatatggtgctggtactggttatggtggctatggaggtggttacggt
ggtggttatggtggaggtcggggatatggtagatatcatccgtatggaagatag

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