Asparagus officinalis (garden asparagus): 109828925
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Entry
109828925 CDS
T05243
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109828925
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
90S particles
Other 90S particles
109828925
Pre-60S particles
Other pre-60S particles
109828925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WD40_RFWD3
WDR55
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR3_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
Beta-prop_WDR41
Ge1_WD40
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
109828925
NCBI-ProteinID:
XP_020251507
LinkDB
All DBs
Position
1:109076578..109089681
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AA seq
476 aa
AA seq
DB search
MIAAVCWVPKGVAKIVPEEATEPDSNEEIEEAKQDEASEEEKDEGEMDVDGSEEGDEVAR
ALAAVEGLGKSKGNKSSTDVNDIASRLNELMSGYDNEDDVPDCIAAGVGNLYYPSNDMDP
YLQDKDDDEDEEIDDMVIKPTDAVIVSACTDEEDEYSYLQVSIYEESEDGESNMFTHQEK
ILSAFPLCTAWLDFKPGSEDKGNFIAVGTMEPAIEIWDLDLIKEENPSMALGGRSEKSGK
YKSGSHKGSVLGLAWNKEFRNVLASASADKSVKIWDLEKRKCVATAKHHTDKVQAVVWNR
HSAESLISGSFDRSIVMMDCRNMENPSNKWSIPADVESLAWDPHNEHSFVVSLDNGTVQG
FDVRTASSNSDSGSKSTFTLHAHDAAVTSVSYNPIAPNLFATGSLDKMVKLWDLSNNQPS
CVASQNTKSGRIFSISFSEDTPFLLAIGGKKGGLKVWDILSEPAIARSFGKYSKQV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgctgtatgttgggtccccaagggggtcgccaagattgtccccgaggaggcc
actgagccagactccaatgaagaaatcgaggaagcaaagcaagatgaagcaagtgaagag
gagaaggatgagggggaaatggatgtggacggttctgaagagggggatgaagttgcccgt
gcattagctgctgttgagggcctcggaaagagtaaaggaaacaagagctctaccgatgta
aatgacattgctagtcggcttaatgagctcatgagcggctatgataacgaggatgacgtc
cctgattgcattgctgctggagtgggcaacctttactacccgagtaatgacatggaccct
tatttgcaagacaaagatgatgatgaggacgaagagattgatgacatggtcattaagcca
acagatgcagtgatagtttctgcatgtactgatgaggaggatgagtatagttatctccag
gtttcaatttatgaagaatctgaagatggggaatctaatatgttcactcatcaggagaaa
atcctatctgcttttccactctgcacggcctggcttgattttaaacctggaagtgaggat
aaaggaaactttatagctgttggtaccatggaaccggctattgaaatttgggaccttgat
ttgatcaaggaggagaatccatctatggcattggggggaagatcagagaaatctgggaag
tacaaatcaggtagtcacaaaggatctgtgcttggtcttgcatggaataaagagttccgg
aatgtacttgctagtgcgagtgctgacaaatctgtcaagatctgggatttggagaagagg
aaatgtgttgccacagccaagcaccacacagacaaggttcaagccgtcgtatggaaccgg
cattcagcagaatcacttatcagtgggtcttttgatcgatcaattgtcatgatggattgt
agaaacatggaaaatcccagcaataaatggtctataccagctgatgttgagagcttagcg
tgggatccgcacaatgagcacagttttgtggttagtcttgataatggcacagttcaaggt
tttgatgtcaggacagcttcatctaactcagactctggctccaagtcaacttttactctt
catgcacatgatgcagctgttacttctgtttcttacaatcctattgcacctaatcttttt
gccacaggatctcttgataaaatggtgaagctctgggacttatcaaacaaccaaccatca
tgtgttgcgtctcagaatactaaatcaggacgcattttttcaatatccttctctgaggat
acccctttcctgcttgcaattggagggaaaaaaggcggacttaaagtatgggacatatta
tcggagcctgcaattgctcgaagttttgggaaatatagcaaacaagtttga
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