Asparagus officinalis (garden asparagus): 109829036
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Entry
109829036 CDS
T05243
Name
(RefSeq) nuclear poly(A) polymerase 1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109829036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109829036
Enzymes [BR:
aof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109829036
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
109829036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
NMB1110-like_C
Motif
Other DBs
NCBI-GeneID:
109829036
NCBI-ProteinID:
XP_020251674
LinkDB
All DBs
Position
1:113217714..113225550
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AA seq
715 aa
AA seq
DB search
MASPGFVKRTNGRLGVTEPISLGGPTEFDVIKTQELEKYLADAGLYESQEEAVSREEVLG
RLDQIVKNWVKNISRQKGFNEQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR
EDDFFVELQNMLAEMPEVSELHPVPDAHVPVMKFKFSGVSIDLLYAKLALWVIPEDLDIS
QDSILQNADEQTVRSLNGCRVTDQILRLVPNIQTFRTTLRCMRLWAKKRGVYSNVLGFLG
GINWALLVARICQLYPNALPSTLVSRFFRVYTQWRWPNPVMLCDIEEGSLGLPVWDPRRN
FRDRTHLMPIITPAYPSMNSSYNVSASTLRIMTDEFQRGNDICKLMETNKADWNTLFEPY
PFFEAYKNYLEIDIAAEDEDDFRNWKGWVESRLRFLTLNIERQTFGKLQCHPHPRDFSEK
SKPLHCCYFMGLQRKQGVPSKEGEQFDIRATVEDFKSNVGSYILWKPGMEIHVSHIKQRN
VPLFVFPGGMRPSRPPRVSKPKASSLTHSPSHMETFSENGDKSVDMADVSSIRNQFDSVV
SVDVEEESKKRKHVEDAASRSLADVKRPAFAKSPETMNTIVHGTNAEESAVVLCAKEAEA
LDIKNLNGSSSPTVVALPEELDELGDCGIQGKPEEVGVAANGCSADKSDAKDVIMQTGSF
GSSNPRNGGIEELEPLELSAPVYSGLPAPTSNAPKKPLIRLRLTSIAAKGTGGSS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccctggatttgttaagagaactaatgggcgccttggcgttactgaaccaatc
tcgcttggtgggccgactgaattcgatgtgatcaagacccaggaactcgaaaagtatctt
gctgacgctgggttatatgaaagccaagaagaagctgtttcaagagaggaagtccttggg
agattagaccagattgtaaaaaattgggtaaagaacataagcagacagaagggtttcaac
gaacaatttgtgcaggaagctaatgcgaagatatttacttttggatcttatcgcctaggg
gtacatggccctggtgctgatatagatacattatgtgttggtccgagacatgcaactaga
gaggatgacttctttgtagaacttcagaacatgctggctgagatgccagaagtgagtgaa
ctccatcccgtgcctgatgcacatgttcctgtgatgaaattcaaatttagtggggtttct
atcgatcttctatacgcaaagctcgcactctgggtgatacctgaagacttggatatctca
caggactccatattacagaatgctgatgaacaaactgtccgtagtttgaacgggtgcaga
gtcaccgatcaaatattgcgtctggtgcccaatattcagacttttcgtacaaccttgaga
tgcatgaggctttgggcaaagaaacgtggtgtttactcaaatgttttaggtttcctaggt
ggaattaattgggctttgcttgtagcgaggatatgtcagttgtatcctaatgctttgcca
agcacattggtatctcggttttttagggtttatacacaatggcgctggccaaatccagtg
atgctatgtgatattgaagagggaagtcttggtcttcctgtttgggacccgagaagaaat
tttagagaccggacacatctgatgcctattatcacgccggcttatccttctatgaattcc
agctacaatgtctcggcaagtacactgcgtattatgactgatgagttccagcggggaaat
gatatttgtaagttaatggagacaaataaagctgattggaatactctatttgagccctat
cccttctttgaggcctacaagaattatttggagatagatattgctgcagaagatgaagat
gatttcagaaattggaaaggctgggtcgaatcacgtcttcgctttctcacattgaatatt
gaaaggcaaacatttgggaagcttcaatgtcatcctcatccacgtgatttttcagaaaaa
tccaaaccattgcactgttgttacttcatgggtcttcagagaaagcaaggggtaccatca
aaagaaggcgagcaatttgatataagggcaacagtcgaagattttaagagcaatgtcggc
agttacatactatggaaacctgggatggaaatccatgtttctcatataaaacaaagaaat
gtcccgctttttgtttttcctggtggtatgaggccctctcgtcctcctagagtctcaaaa
cctaaggcctcaagtttgactcattctccttcacatatggaaacttttagtgagaatggt
gacaagtctgttgatatggccgatgtttctagcataaggaatcaattcgattcagttgta
tctgttgatgtagaagaagaatcgaaaaagaggaaacatgtggaagatgctgcatctaga
agcctagctgatgtaaagagaccagcttttgcaaaatcaccagaaactatgaacactata
gttcatggtactaatgctgaggaatctgcagtagttttgtgcgctaaagaagctgaagca
cttgatattaagaatttaaatggttcttcatctcccactgtggtggctttgcctgaagag
cttgatgagcttggggattgtggaattcaagggaagcctgaagaagttggagttgctgca
aatggctgttctgctgataagtctgatgcaaaggatgtcataatgcaaacgggaagtttt
ggttcaagcaatcctaggaatggaggcattgaagagctcgagcctttagagttatctgca
ccggtttacagtgggcttcctgctccaacatctaatgctccaaagaagccactcatcagg
ttaagattaacttctatagcagcaaaaggaactggaggaagttcttaa
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