Asparagus officinalis (garden asparagus): 109829084
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Entry
109829084 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: putative chloride channel-like protein CLC-g
KO
K05016
chloride channel 7
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aof01009
]
109829084
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109829084
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aof04040
]
109829084
Protein phosphatases and associated proteins [BR:
aof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109829084
Membrane trafficking [BR:
aof04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
109829084
Ion channels [BR:
aof04040
]
Chloride channels
Chloride channel (CLC)
109829084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
109829084
NCBI-ProteinID:
XP_020251755
LinkDB
All DBs
Position
1:1805801..1812308
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AA seq
783 aa
AA seq
DB search
MDTTLRVVPNIIANNGDRRRRGERNRRAPRRLAPNATSQXAIVGSSLCPVESLDYEIIEN
DLFKQDWRNRGRAHVLQYVFLKWTFCSLVGILCGRXXXXCVGFFSNLAVESVAGFKLVRV
SGLMFQNRFWLAFTVFSVSNFALLMVATIITVYVSPAAAGSGIPEVKAYLNGVDAPNIFS
LKTLLVKIIGNVAAASSSLQVGKAGPMVHTGACIAALIGQGGSRKYGLTCEWLHYFKNNR
DRRDLVTCGAGAGIAAAFRAPVGGVLFALESMSSWWRSALLWRASFTTAVVALMLQTIID
MCNSGKCGLFGKGGLIMFDVSSDHVAYHLADIPLVILLGVIGGVLGSLYNFLMEKVLTFY
NLINEQGRGCKLLLAAIISILTSGCLFGLPWLASCTPCPVDTKEACPCKTGNFKNFQCPP
NHYNALASLFFNTNDNTIKNLYTSGTDKVFDKFSVLIFFITSYFLGILSYGVVAPSGLFA
PVILIGATYGRFVGILMGSSSNLDHGLFAVLGSASFLGGTMRMTVSVCVIILELTNNLLL
LPFVMLVLLISKTVADLFNADIYDLIMKLKGLPYLEAHAEPYMRHLTVSDVVTGPLRMFN
GVEKVGNIVHILKTTGHNGFPVIDKLPFSNSSVLFGLVLRAHLLVVLKKRDFLPDCISPS
GNALARYSAEEFANCGIGKRDSIEDVVLTEEEMEMFVDLHPFTNASPYTVVETMSLAKAI
ILFRKLGLRHLLVVPKPSSRAPIVGILTRHDFMPEHILGXEIEISKVHLSQILQEFSYGT
QLC
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggacactacccttcgtgttgttccaaatatcattgctaacaatggcgaccgaaggcga
agaggagagagaaacaggcgagccccccgccggctcgctcccaacgcaacctcccagngc
gccatcgtcggatccagcctctgccccgtcgagagcctcgattacgagattatagagaac
gatttgtttaagcaagactggaggaatcgagggcgggctcacgtactgcagtacgtgttc
ttgaaatggaccttctgctccttggttgggatactctgcggccgtcnnnnnnnnnnctgc
gtcgggttcttcagcaatctcgccgtggagagcgtcgccggattcaagctcgtccgcgtc
tccggcctaatgttccagaacaggttctggctggctttcactgttttttcagtgtcaaac
ttcgcccttttgatggtggcgacgatcattactgtttatgtttctccagctgcagctgga
tcagggataccagaggtgaaagcttacttgaatggtgttgatgcacctaatatcttctct
cttaagacactgttagtgaagattattggtaacgttgctgctgcgtcgtcatctcttcag
gtgggcaaagcaggcccaatggtgcacaccggtgcgtgcattgctgccttaattggacag
ggaggttctcgaaaatatggcttgacatgtgaatggcttcactacttcaagaacaacaga
gataggcgtgatcttgtgacctgtggagctggtgctggtattgctgctgctttccgtgca
cctgttggtggtgttctgtttgctcttgaatcaatgtcatcatggtggagaagtgcctta
ctgtggagagcatcctttacaacagctgtggttgctctcatgcttcagacgattattgat
atgtgtaatagtggaaaatgtggtttatttggaaagggtgggttgattatgtttgatgtt
tcgtcggatcatgttgcatatcaccttgcggacatacctcttgttatcctccttggagtt
attggtggagtacttggaagtctctacaatttcctcatggagaaggttcttacattctac
aatcttatcaatgagcaaggtcggggctgcaaacttctactcgctgcaatcatttcgata
ctcacatcaggttgtctcttcggattaccatggcttgcatcttgcacgccttgtcctgtc
gacacaaaggaagcttgcccatgcaagactggcaacttcaagaacttccaatgccctcca
aaccattacaatgctctcgccagcttatttttcaacaccaacgacaacacaatcaaaaac
ctctacacttcaggcacagacaaagtgtttgataagttctctgtccttatattcttcatc
acaagttatttccttggaatcttaagctatggggttgtggccccatctggtctctttgcg
ccagttatattgattggtgcaacttatggaagatttgttggtattctaatgggatcaagc
tcaaatctggatcatggcctctttgctgtccttggttcagcttcttttcttggtggcaca
atgaggatgacagtttcagtctgtgtcataatcttagaactgaccaacaaccttctacta
cttccttttgtaatgctagttcttctaatatctaaaacggtggctgatttattcaatgcg
gatatttatgacctaatcatgaagttgaagggtcttccatatcttgaagcccatgctgag
ccttatatgagacatctcacagttagtgatgtggtaacggggcctctcagaatgtttaat
ggtgtggaaaaagttggaaatatagttcacattttgaagacaactggacataacgggttt
cctgttatcgataaactcccattttcaaactcatcggtgttgtttggtttagttcttaga
gctcaccttcttgtagtgttgaagaagagagatttcttgccagattgtatatcaccaagt
gggaatgccttggcgcgctactctgcagaggaatttgctaattgtggaataggcaaacgc
gatagcattgaggatgttgtactcactgaagaggagatggaaatgtttgttgatctgcat
ccatttacaaatgcatctccttatactgttgttgagaccatgtcactggcgaaagctatc
atactttttcgaaaactcggtttgaggcacttattggttgttcccaaaccctcttctaga
gcacctatagttggaatattaactagacatgattttatgcctgaacacatactggganaa
gagattgagatttcaaaggtccacttaagccaaatacttcaggagttttcttatgggacg
caactctgttga
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