Asparagus officinalis (garden asparagus): 109829119
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Entry
109829119 CDS
T05243
Name
(RefSeq) actin-interacting protein 1-2-like
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aof04990
]
109829119
Domain-containing proteins not elsewhere classified [BR:
aof04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
109829119
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
eIF2A
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_SPT8
SGL
Beta-prop_SCAP
KNTC1_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
109829119
NCBI-ProteinID:
XP_020251813
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All DBs
Position
1:complement(115415107..115428516)
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AA seq
498 aa
AA seq
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MRIVASGDGKGKSLVRAFMWDSGSTVGEFDGHSKRVLSCTFKPTRPFRVVTGGEDFIVNF
YEGPPFKFKLSHREHTNFVNCVRYSPDGNRFITVSSDKKGVIYDGKTAEKIGELSMEDGH
KGSIYAVSWSPDSKQVLTVSADKTAKVWDIMEDGNGKLNRALASPGSGGVEDMLVGCLWQ
NDQLVVVSLGGTISIFSASDQDKPPISFAGHMKGINALTCFVQDGKKMMLTSSYDGVISR
WTPGIGYIGKLQRKDNSQIKCFAAVEQEVITSGFDNKVCRVPLTGDQCGVAESVDVGSQP
KDIHFASQSPELALISTDSGVVLLRGSKIASTIDLGFTVAASALAPNGDEAIVGGQDGKL
HIYCIEGDTLKEEAVLEKHRGAITVISYSPDLSMFASADANREAVVWDRASREVKLKNML
YHTARINCLAWSPDNQMVATGSLDTCVIVYDVDKPASNRVTIKGAHLGGVSGLAFDDENS
VVSSGEDGCVRVWKLNQQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaggattgttgcgtccggggatgggaaggggaaatcgttggttagggcgttcatgtgg
gattcaggctccacagttggggagtttgatggacattctaagagggtattgagttgcact
ttcaaacctactagaccattccgcgttgtcaccggtggggaagatttcatagtgaacttc
tacgagggaccaccatttaaattcaagctttcacacagggaacacacaaattttgttaac
tgtgtacgttattctcctgatggaaatagatttatcactgtaagctcagataagaaagga
gtaatatatgatggaaagactgcagaaaagattggagagttgtccatggaagatggtcac
aaaggaagcatatatgctgttagctggagtcctgatagtaaacaagtcctgaccgtatct
gctgataaaaccgcaaaagtgtgggatatcatggaggatggaaatgggaaactgaataga
gcattggcttcaccagggtcaggtggagtcgaggacatgcttgttggctgcctgtggcag
aatgaccagcttgttgttgtctctcttggtggaacaataagtattttctcagcaagtgat
caggacaaaccacctatatcttttgctgggcacatgaagggcattaatgcattgacttgt
ttcgtacaagacgggaagaaaatgatgttgaccagcagttatgatggtgtcatatcaaga
tggactccaggcattggttacattggcaaactacaaaggaaggacaattctcaaattaag
tgctttgctgcagttgaacaagaagttattacatcaggatttgacaataaggtgtgcaga
gttcctttgactggggatcaatgtggagttgcagaatctgttgatgttggctctcagccc
aaggatatacactttgcatcacaatctcctgaacttgctttaatttcaactgattcagga
gttgtcttactacgtggttcaaaaatagcatcaaccatcgatcttggatttactgtggct
gcatctgcacttgcacctaatggagatgaagccattgttggaggtcaagatggaaaactc
cacatttattgcattgagggagatacattgaaagaggaagccgtgcttgagaagcaccgt
ggtgcgattactgttatatcttactctccagatctctccatgttcgcttcagcagatgct
aatagagaagctgtagtatgggaccgtgcatcccgagaggtgaaactaaagaacatgctg
taccacacggcacgtatcaactgcctagcatggtctcctgataaccaaatggtcgctact
ggttctcttgacacctgtgtgattgtgtacgacgtagacaagcctgcaagcaatcgagta
acgataaaaggagctcacttgggaggagtctctggtttggctttcgatgatgagaacagt
gtggtgagctcaggagaagatggatgtgttcgtgtgtggaaacttaaccagcagtaa
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